RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 RENP00797 406 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 GYPBP06028 91 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 IRF2P14316 349 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 CPT2P23786 658 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 GNRHRP30968 328 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 BRS3P32247 399 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 NDUFA6P56556 154 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 LCN2P80188 198 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 MXD1Q05195 221 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 SSX1Q16384 188 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 SMN1Q16637 294 aaKnown RBP8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 TMEM241Q24JQ0 296 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 KHDC3LQ587J8 217 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 OR10K2Q6IF99 312 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 DNM1P34Q6PK57 102 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 LINC01551Q86U37 167 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 APH1BQ8WW43 257 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 HRASLS5Q96KN8 279 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 TMEM106BQ9NUM4 274 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 DOK5Q9P104 306 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 MGAT4CQ9UBM8 478 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 POMT1Q9Y6A1 747 aa8.11□□□□□ -1.11
NIF3L1-202ENST00000409020 WNK2Q9Y3S1 2297 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 A0A0U1RQK1 487 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 ZNF320A2RRD8 509 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 SNRPGP15A8MWD9 76 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 DFFBO76075 338 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 CDRT1O95170 752 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 VENTXO95231 258 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 HLA-DQA2P01906 255 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 HLA-DPB1P04440 258 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 COMPP49747 757 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 OR10A3P58181 314 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 UBE2V1Q13404 147 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 TAF9Q16594 264 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 SMIM21Q3B7S5 101 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 FBXW12Q6X9E4 464 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 TMEM179BQ7Z7N9 219 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 COMMD2Q86X83 199 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 C1orf174Q8IYL3 243 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 JAGN1Q8N5M9 183 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 IQCF1Q8N6M8 205 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 RAB1CQ92928 201 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 MRGPRFQ96AM1 343 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 OR8B4Q96RC9 309 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 NRIP2Q9BQI9 281 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 GCM1Q9NP62 436 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 EXOSC4Q9NPD3 245 aaKnown RBP8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 NDUFB11Q9NX14 153 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 HSPB7Q9UBY9 170 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 CGGBP1Q9UFW8 167 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 KPTNQ9Y664 436 aa8.1□□□□□ -1.11
NIF3L1-202ENST00000409020 F5H5P2 479 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 TOMM40O96008 361 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 PIPP12273 146 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 F2RL1P55085 397 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 CRMP1Q14194 572 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 HERPUD1Q15011 391 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 SNAI3Q3KNW1 292 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 FAM201AQ5SY85 155 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 OR2W3Q7Z3T1 314 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 LRRTM1Q86UE6 522 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 C11orf42Q8N5U0 333 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 APOBEC3DQ96AK3 386 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 TIMD4Q96H15 378 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 ATF6BQ99941 703 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 TSSK6Q9BXA6 273 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 HCAR1Q9BXC0 346 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 C1QTNF5Q9BXJ0 243 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 GABARAPL3Q9BY60 117 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 MED20Q9H944 212 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 GPN1Q9HCN4 374 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 PPP1R3CQ9UQK1 317 aa8.09□□□□□ -1.11
NIF3L1-202ENST00000409020 TRAV39A0A0B4J263 110 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 FAM183AA6NL82 134 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 A6NLC8 198 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 TRAPPC2LH3BP13 241 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 MFNGO00587 321 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 IL5P05113 134 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 UCHL1P09936 223 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 STAG3L2P0CL84 134 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 CRISP1P54107 249 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 PJVKQ0ZLH3 352 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 OR5I1Q13606 314 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 OR2T5Q6IEZ7 315 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 FAM220AQ7Z4H9 259 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 MRPL41Q8IXM3 137 aaKnown RBP8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 HS3ST5Q8IZT8 346 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 RFLNBQ8N5W9 214 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 OR8G5Q8NG78 346 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 OR52L1Q8NGH7 329 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 OR1S2Q8NGQ3 325 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 OR2T29Q8NH02 315 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 OR2AE1Q8NHA4 323 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 DVL3Q92997 716 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 RAB39BQ96DA2 213 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 KCTD7Q96MP8 289 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 FAM96BQ9Y3D0 163 aa8.08□□□□□ -1.12
NIF3L1-202ENST00000409020 DYSFO75923 2080 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms