RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PRR18Q8N4B5 295 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 TMEM104Q8NE00 496 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 RTN4IP1Q8WWV3 396 aaPredicted RBP7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 SGCDQ92629 289 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 FAM46BQ96A09 425 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 GALMQ96C23 342 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 RCC1LQ96I51 464 aaKnown RBP7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 RASL11BQ9BPW5 248 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 MCRIP2Q9BUT9 160 aaKnown RBP7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 ANKRD60Q9BZ19 345 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 GHITMQ9H3K2 345 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 PLGRKTQ9HBL7 147 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 TAF9BQ9HBM6 251 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 OR2S2Q9NQN1 319 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 MBNL3Q9NUK0 354 aaKnown RBP7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 ZMAT5Q9UDW3 170 aaKnown RBP7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 STEAP1Q9UHE8 339 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 PLXNB1O43157 2135 aa7.21□□□□□ -1.25
SNORD88A-201ENST00000408314 IGHV3-43A0A0B4J1X8 118 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 A0A1W2PPE3 182 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 UBE2QL1A1L167 161 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 ADARB2-AS1A8MUL3 147 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 G3V4G9 280 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 SLC22A1O15245 554 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 LANCL1O43813 399 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 IGHG2P01859 326 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 HSMCR30P0CW71 290 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 IGHV3-43DP0DP04 118 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 CHATP28329 748 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 REG1BP48304 166 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 AQP4P55087 323 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 GP2P55259 537 aaKnown RBP7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 TPBGQ13641 420 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 IRF3Q14653 427 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 FAM71F2Q6NXP2 309 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 PRSS48Q7RTY5 328 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 ZNF439Q8NDP4 499 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 OR2AK2Q8NG84 335 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 OR10V1Q8NGI7 309 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 ST6GALNAC6Q969X2 333 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 EAF1Q96JC9 268 aaPredicted RBP7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 CHCHD6Q9BRQ6 235 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 ABHD14AQ9BUJ0 271 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 TM2D1Q9BX74 207 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 CCDC90BQ9GZT6 254 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 DUSP21Q9H596 190 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 CHMP1AQ9HD42 196 aaPredicted RBP7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 ACOT13Q9NPJ3 140 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 ZNF581Q9P0T4 197 aa7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 LSM2Q9Y333 95 aaKnown RBP7.21□□□□□ -1.26
SNORD88A-201ENST00000408314 NOTCH3Q9UM47 2321 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 NUDT19A8MXV4 375 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 YPEL1O60688 119 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 VSIG8P0DPA2 414 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 ARSBP15848 533 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 VDAC1P21796 283 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 SOX6P35712 828 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 RPL23AP62750 156 aaKnown RBP7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 MRPS15P82914 257 aaKnown RBP7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 DCTN2Q13561 401 aaKnown RBP7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 HMGN3Q15651 99 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 RAB11BQ15907 218 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 CXorf66Q5JRM2 361 aaPredicted RBP7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 UTF1Q5T230 341 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 LIPKQ5VXJ0 399 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 TEX38Q6PEX7 206 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 ZNF367Q7RTV3 350 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 LRRTM1Q86UE6 522 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 STPG2Q8N412 459 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 Q8N6K4 173 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 WFDC9Q8NEX5 89 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 OR1L1Q8NH94 360 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 UBALD1Q8TB05 177 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 MRPL30Q8TCC3 161 aaKnown RBP7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 EDARADDQ8WWZ3 215 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 YPEL2Q96QA6 119 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 S1PR3Q99500 378 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 ABCG5Q9H222 651 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 PLEKHJ1Q9NW61 149 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 PIPOXQ9P0Z9 390 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 ZNF580Q9UK33 172 aa7.2□□□□□ -1.26
SNORD88A-201ENST00000408314 IGHV3-72A0A0B4J1Y9 119 aa7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 SH2D7A6NKC9 451 aaPredicted RBP7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 TMEM14DPA8MWL7 114 aa7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 ANKRD65E5RJM6 399 aa7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 SLC17A2O00624 439 aa7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 PDCD5O14737 125 aa7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 MRPS14O60783 128 aaKnown RBP7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 ELANEP08246 267 aa7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 CD37P11049 281 aa7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 CPEP16870 476 aa7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 RCC1P18754 421 aaPredicted RBP7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 CRHBPP24387 322 aa7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 BLVRBP30043 206 aaPredicted RBP7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 GPR12P47775 334 aa7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 LSAMPQ13449 338 aa7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 DIAPH2-AS1Q14236 149 aa7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 TBCEQ15813 527 aaPredicted RBP7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 PNLIPRP3Q17RR3 467 aa7.19□□□□□ -1.26
SNORD88A-201ENST00000408314 MORN2Q502X0 79 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms