RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 TAF9BQ9HBM6 251 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 MMP26Q9NRE1 261 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 CYTL1Q9NRR1 136 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 LSM5Q9Y4Y9 91 aaKnown RBP10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 POMT1Q9Y6A1 747 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 VPS13CQ709C8 3753 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 ARID1AO14497 2285 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 ZNF503-AS2A6NEH8 195 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 WNT2P09544 360 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 COX5AP20674 150 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 PRSS12P56730 875 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 HLA-DRB3P79483 266 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 TSC22D1Q15714 1073 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 PHLDA2Q53GA4 152 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 FAM76BQ5HYJ3 339 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 SPIN3Q5JUX0 258 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 OR2T2Q6IF00 324 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 ZNF880Q6PDB4 577 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 BRICD5Q6PL45 260 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 BHLHA15Q7RTS1 189 aaPredicted RBP10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 COMMD1Q8N668 190 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 OR10J5Q8NHC4 309 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 LILRB1Q8NHL6 650 aaPredicted RBP10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 MSI2Q96DH6 328 aaKnown RBP10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 AKR1E2Q96JD6 320 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 TMEM56Q96MV1 263 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 BCL2L14Q9BZR8 327 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 SLC25A31Q9H0C2 315 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 TMEM222Q9H0R3 208 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 SPEF1Q9Y4P9 236 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 TMEM56-RWDD3S4R434 201 aa10.9□□□□□ -0.66
SMARCB1-203ENST00000407082 NPIPB11E5RHQ5 1161 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 TUSC2O75896 110 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 SCGB1D2O95969 90 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 CA6P23280 308 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 KCNJ3P48549 501 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 RAB5CP51148 216 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 UCP2P55851 309 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 OR8G1Q15617 311 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 SWI5Q1ZZU3 235 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 LDLRAD3Q86YD5 345 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 FAM169BQ8N8A8 192 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 UBAC2Q8NBM4 344 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 GLYATL2Q8WU03 294 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 SECTM1Q8WVN6 248 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 DYRK2Q92630 601 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 RRNAD1Q96FB5 475 aaKnown RBP10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 MARS2Q96GW9 593 aaKnown RBP10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 LINC00052Q96N35 136 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 BARX1Q9HBU1 254 aaPredicted RBP10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 FAM212BQ9NTI7 297 aaPredicted RBP10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 AMDHD2Q9Y303 409 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 MXRA5Q9NR99 2828 aa10.89□□□□□ -0.67
SMARCB1-203ENST00000407082 MPTX1A8MV57 137 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 ZNF705EA8MWA4 302 aaPredicted RBP10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 HAX1O00165 279 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 SYNGR1O43759 233 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 SLC25A6P12236 298 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 ZNF44P15621 663 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 GNRHRP30968 328 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 SULT1A2P50226 295 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 IDH3GP51553 393 aaPredicted RBP10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 TAGLNQ01995 201 aaKnown RBP10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 PDCD1Q15116 288 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 TUSC1Q2TAM9 212 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 FAM74A1Q5RGS3 127 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 TMEM268Q5VZI3 342 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 TBC1D26Q86UD7 250 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 FOXRED2Q8IWF2 684 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 SPAG16Q8N0X2 631 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 BHLHE23Q8NDY6 225 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 OR1J1Q8NGS3 322 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 MRPL30Q8TCC3 161 aaKnown RBP10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 S100PBPQ96BU1 408 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 PERPQ96FX8 193 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 CABLES2Q9BTV7 478 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 ADAT1Q9BUB4 502 aaKnown RBP10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 OR2S2Q9NQN1 319 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 PRR13Q9NZ81 148 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 KCNIP1Q9NZI2 227 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 LPAR3Q9UBY5 353 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 NDRG3Q9UGV2 375 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 OR2W1Q9Y3N9 320 aa10.88□□□□□ -0.67
SMARCB1-203ENST00000407082 H0Y980 276 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 CRLF1O75462 422 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 NXPH2O95156 264 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 MBPP02686 304 aaPredicted RBP10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 SEC11BP0C7V7 166 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 VDAC1P21796 283 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 UCP1P25874 307 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 GCH1P30793 250 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 CCKARP32238 428 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 CD200P41217 278 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 NKX2-1P43699 371 aaPredicted RBP10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 VAMP2P63027 116 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 PJVKQ0ZLH3 352 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 ZNF718Q3SXZ3 478 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 SP6Q3SY56 376 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 IGSF11Q5DX21 431 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 LYZL2Q7Z4W2 148 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms