RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 CTXN2P0C2S0 81 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 ACP1P24666 158 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 ATP6V0CP27449 155 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 IL2RGP31785 369 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 RPS16P62249 146 aaKnown RBP6.59□□□□□ -1.35
HDAC9-201ENST00000401921 TLE1Q04724 770 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 GTF3C1Q12789 2109 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 AARDQ4LEZ3 155 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 SPANXN5Q5MJ07 72 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 HES3Q5TGS1 186 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 SPNS3Q6ZMD2 512 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 MDP1Q86V88 176 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 OR5A2Q8NGI9 324 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 NINJ1Q92982 152 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 MSI2Q96DH6 328 aaKnown RBP6.59□□□□□ -1.35
HDAC9-201ENST00000401921 PRDM13Q9H4Q3 707 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 Q9N2K0 584 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 POMT1Q9Y6A1 747 aa6.59□□□□□ -1.35
HDAC9-201ENST00000401921 C7orf77A4D0Y5 90 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 ZFP92A6NM28 416 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 LILRA1O75019 489 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 SP1P08047 785 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 SEC11BP0C7V7 166 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 RPS10P46783 165 aaKnown RBP6.58□□□□□ -1.36
HDAC9-201ENST00000401921 FABP6P51161 128 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 CLDN18P56856 261 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 TNFRSF9Q07011 255 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 PDZD11Q5EBL8 140 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 TMEM42Q69YG0 159 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 OR8G2PQ6IF36 304 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 LCN15Q6UWW0 184 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 FAM185AQ8N0U4 392 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 TMEM252Q8N6L7 170 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 OR1J1Q8NGS3 322 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 HPSE2Q8WWQ2 592 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 IP6K3Q96PC2 410 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 TRIB1Q96RU8 372 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 OR2J1Q9GZK6 312 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 KCNIP1Q9NZI2 227 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 A0A1W2PPH5 198 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 SNRPCP09234 159 aaKnown RBP6.58□□□□□ -1.36
HDAC9-201ENST00000401921 PSG2P11465 335 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 RAB5AP20339 215 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 VDAC1P21796 283 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 RNPS1Q15287 305 aaKnown RBP6.58□□□□□ -1.36
HDAC9-201ENST00000401921 SAPCD1Q5SSQ6 148 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 BTNL8Q6UX41 500 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 GUCD1Q96NT3 240 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 RARRES2Q99969 163 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 ABHD14AQ9BUJ0 271 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 RTL8AQ9BWD3 113 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 CACFD1Q9UGQ2 172 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 LIPGQ9Y5X9 500 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 SPTA1P02549 2419 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 ZNF503-AS2A6NEH8 195 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 PPIHO43447 177 aaKnown RBP6.58□□□□□ -1.36
HDAC9-201ENST00000401921 CDS2O95674 445 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 METTL15P1P0C7V9 234 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 GABRA2P47869 451 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 UBE2KP61086 200 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 IL15RAQ13261 267 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 MPV17LQ2QL34 196 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 ZNF766Q5HY98 468 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 MYPOPQ86VE0 399 aaPredicted RBP6.58□□□□□ -1.36
HDAC9-201ENST00000401921 SELENOHQ8IZQ5 122 aaKnown RBP6.58□□□□□ -1.36
HDAC9-201ENST00000401921 GPR87Q9BY21 358 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 GNG13Q9P2W3 67 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 CACNG5Q9UF02 275 aa6.58□□□□□ -1.36
HDAC9-201ENST00000401921 STRAPQ9Y3F4 350 aaKnown RBP6.58□□□□□ -1.36
HDAC9-201ENST00000401921 USF3Q68DE3 2245 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 WDFY3Q8IZQ1 3526 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 MED12LQ86YW9 2145 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 A0A1W2PPE2 198 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 IGSF23A1L1A6 192 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 PHOX2AO14813 284 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 CLDN1O95832 211 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 LYL1P12980 280 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 SNCAP37840 140 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 CEACAM6P40199 344 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 ELLP55199 621 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-201ENST00000401921 ERVS71-1P61550 626 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 RFESDQ8TAC1 157 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 SLC35B3Q9H1N7 401 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 PLK3Q9H4B4 646 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 DLL3Q9NYJ7 618 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 OR1A1Q9P1Q5 309 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 ATP23Q9Y6H3 246 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 PROB1E7EW31 1015 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 PGLYRP1O75594 196 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-201ENST00000401921 AGFG2O95081 481 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 KRASP01116 189 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 DANCRP0C864 163 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 RAC2P15153 192 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 TAGLN2P37802 199 aaKnown RBP6.57□□□□□ -1.36
HDAC9-201ENST00000401921 CDX1P47902 265 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-201ENST00000401921 CEBPDP49716 269 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-201ENST00000401921 UCP3P55916 312 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 EDDM3AQ14507 147 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 HMGN3Q15651 99 aa6.57□□□□□ -1.36
HDAC9-201ENST00000401921 TMEM178AQ8NBL3 297 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms