RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 C22orf15Q8WYQ4 148 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 PTTG2Q9NZH5 202 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 FABP7O15540 132 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 LPLP06858 475 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 DGCR2P98153 550 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 RNASE12Q5GAN4 147 aaKnown RBP12.97□□□□□ -0.33
HMGA1-204ENST00000401473 GPR157Q5UAW9 335 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 NCR3LG1Q68D85 454 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 FAM131AQ6UXB0 335 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 LYSMD2Q8IV50 215 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 BEST4Q8NFU0 473 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 OR11H6Q8NGC7 330 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 OR10V1Q8NGI7 309 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 OR52M1Q8NGK5 317 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 GFOD1Q9NXC2 390 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 OR1A1Q9P1Q5 309 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 ANAPC10Q9UM13 185 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 MGAT4AQ9UM21 535 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 IGHV1-69DA0A0B4J2H0 117 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 CRLF1O75462 422 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 IGHV1-69P01742 117 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 CD34P28906 385 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 MORN2Q502X0 79 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 BCL6BQ8N143 479 aaPredicted RBP12.97□□□□□ -0.33
HMGA1-204ENST00000401473 OR13D1Q8NGV5 346 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 C17orf50Q8WW18 174 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 AJUBAQ96IF1 538 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 BEX2Q9BXY8 128 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 SCPEP1Q9HB40 452 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 ZNF69Q9UC07 566 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 SLC23A1Q9UHI7 598 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 ANXA10Q9UJ72 324 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 CDC42EP3Q9UKI2 254 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 NUP50Q9UKX7 468 aa12.97□□□□□ -0.33
HMGA1-204ENST00000401473 A0A1W2PPE3 182 aa12.96□□□□□ -0.33
HMGA1-204ENST00000401473 SULT1C2O00338 296 aa12.96□□□□□ -0.33
HMGA1-204ENST00000401473 IGLV1-47P01700 117 aa12.96□□□□□ -0.33
HMGA1-204ENST00000401473 PPP1CCP36873 323 aaKnown RBP12.96□□□□□ -0.33
HMGA1-204ENST00000401473 KIR2DS4P43632 304 aa12.96□□□□□ -0.33
HMGA1-204ENST00000401473 KIR2DS1Q14954 304 aa12.96□□□□□ -0.33
HMGA1-204ENST00000401473 OR4A4PQ8NGN8 299 aa12.96□□□□□ -0.33
HMGA1-204ENST00000401473 PARP12Q9H0J9 701 aaKnown RBP12.96□□□□□ -0.33
HMGA1-204ENST00000401473 GNG12Q9UBI6 72 aa12.96□□□□□ -0.33
HMGA1-204ENST00000401473 BET1O15155 118 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 CTDSPLO15194 276 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 NAT1P18440 290 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 PAX6P26367 422 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 CBX5P45973 191 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 CT45A1Q5HYN5 189 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 ZNF626Q68DY1 528 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 LHFPL4Q7Z7J7 247 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 CT45A3Q8NHU0 189 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 C15orf40Q8WUR7 153 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 FCAMRQ8WWV6 532 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 CLEC7AQ9BXN2 247 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 MTFP1Q9UDX5 166 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 C2CD3Q4AC94 2353 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 TRBV6-7A0A0A0MS04 114 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 ODF3BA8MYP8 253 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 GABARAPH6UMI1 98 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 J3QR06 171 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 SLC31A2O15432 143 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 LANCL1O43813 399 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 YPEL1O60688 119 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 ARG1P05089 322 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 ZBTB25P24278 435 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 SRP14P37108 136 aaKnown RBP12.95□□□□□ -0.34
HMGA1-204ENST00000401473 CEACAM6P40199 344 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 GNG10P50151 68 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 CHRFAM7AQ494W8 412 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 SPANXN2Q5MJ10 180 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 ZNF439Q8NDP4 499 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 SMIM4Q8WVI0 70 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 YPEL2Q96QA6 119 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 CABLES2Q9BTV7 478 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 RAB9BQ9NP90 201 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 IFT46Q9NQC8 304 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 JPT1Q9UK76 154 aa12.95□□□□□ -0.34
HMGA1-204ENST00000401473 NPFFO15130 113 aa12.94□□□□□ -0.34
HMGA1-204ENST00000401473 HNF1AP20823 631 aa12.94□□□□□ -0.34
HMGA1-204ENST00000401473 HLA-DMAP28067 261 aa12.94□□□□□ -0.34
HMGA1-204ENST00000401473 SAA4P35542 130 aa12.94□□□□□ -0.34
HMGA1-204ENST00000401473 RFX2P48378 723 aa12.94□□□□□ -0.34
HMGA1-204ENST00000401473 OR5AP2Q8NGF4 316 aa12.94□□□□□ -0.34
HMGA1-204ENST00000401473 OR4P4Q8NGL7 312 aa12.94□□□□□ -0.34
HMGA1-204ENST00000401473 OR9G1Q8NH87 305 aa12.94□□□□□ -0.34
HMGA1-204ENST00000401473 ATRQ13535 2644 aa12.94□□□□□ -0.34
HMGA1-204ENST00000401473 RBBP9O75884 186 aa12.93□□□□□ -0.34
HMGA1-204ENST00000401473 STEAP3Q658P3 488 aa12.93□□□□□ -0.34
HMGA1-204ENST00000401473 AGMATQ9BSE5 352 aa12.93□□□□□ -0.34
HMGA1-204ENST00000401473 RABL2AQ9UBK7 228 aaPredicted RBP12.93□□□□□ -0.34
HMGA1-204ENST00000401473 RABL2BQ9UNT1 228 aa12.93□□□□□ -0.34
HMGA1-204ENST00000401473 RBMX2Q9Y388 322 aaKnown RBP12.93□□□□□ -0.34
HMGA1-204ENST00000401473 A0A0U1RQK1 487 aa12.93□□□□□ -0.34
HMGA1-204ENST00000401473 HSPA12AO43301 675 aa12.93□□□□□ -0.34
HMGA1-204ENST00000401473 GSTZ1O43708 216 aaPredicted RBP12.93□□□□□ -0.34
HMGA1-204ENST00000401473 MRPS10P82664 201 aaKnown RBP12.93□□□□□ -0.34
HMGA1-204ENST00000401473 HLA-DRB5Q30154 266 aa12.93□□□□□ -0.34
HMGA1-204ENST00000401473 TMEM30BQ3MIR4 351 aa12.93□□□□□ -0.34
HMGA1-204ENST00000401473 PYDC2Q56P42 97 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms