RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 RFNGQ9Y644 331 aa3.26□□□□□ -1.89
CLHC1-201ENST00000401408 TP53BP1Q12888 1972 aaPredicted RBP3.26□□□□□ -1.89
CLHC1-201ENST00000401408 HIVEP3Q5T1R4 2406 aa3.26□□□□□ -1.89
CLHC1-201ENST00000401408 CIB4A0PJX0 185 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 KRBOX1C9JBD0 128 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 COPEO14579 308 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 MRPS12O15235 138 aaKnown RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 OR7C2O60412 319 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 C6orf47O95873 294 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 ATP1B1P05026 303 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 DBIP07108 87 aaKnown RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 PFN1P07737 140 aaKnown RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 CT45A6P0DMU7 189 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 CT45A5P0DMU8 189 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 CT45A7P0DMV0 189 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 PSG1P11464 419 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 AZU1P20160 251 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 RAB5AP20339 215 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 KDELR1P24390 212 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 IGFBP6P24592 240 aaPredicted RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 IL12AP29459 219 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 GPR183P32249 361 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 SLC35A2P78381 396 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 PLP2Q04941 152 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 AWAT1Q58HT5 328 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 CT45A1Q5HYN5 189 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 TPTE2P1Q5T6R2 138 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 GLYATQ6IB77 296 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 C8orf82Q6P1X6 216 aaPredicted RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 HOGA1Q86XE5 327 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 VRK3Q8IV63 474 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 PRR22Q8IZ63 422 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 OR2T33Q8NG76 320 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 CT45A3Q8NHU0 189 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 C8orf46Q8TAG6 207 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 THAP6Q8TBB0 222 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 HIST1H2BAQ96A08 127 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 GMPPAQ96IJ6 420 aaPredicted RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 MROQ9BYG7 248 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 SMIM3Q9BZL3 60 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 PTGES2Q9H7Z7 377 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 AKTIPQ9H8T0 292 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 UBE2TQ9NPD8 197 aaPredicted RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 PLSCR3Q9NRY6 295 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 MED29Q9NX70 200 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 PRNDQ9UKY0 176 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 RAB22AQ9UL26 194 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 TNFSF18Q9UNG2 199 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 COL27A1Q8IZC6 1860 aaPredicted RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 ANAPC1Q9H1A4 1944 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 MED13LQ71F56 2210 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 FBN1P35555 2871 aaKnown RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 A0A0G2JLM5 398 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 TMEM218A2RU14 115 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 BTNL10A8MVZ5 291 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 A8MWP6 167 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 VWC2LB2RUY7 222 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 J3KT08 172 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 CCL25O15444 150 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 ZNF207O43670 478 aaKnown RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 TRMUO75648 421 aaKnown RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 SNRPD1P62314 119 aaKnown RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 RPL18AQ02543 176 aaKnown RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 ZNF763Q0D2J5 394 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 LY6DQ14210 128 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 CLINT1Q14677 625 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 TMEM69Q5SWH9 247 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 ASPHD1Q5U4P2 390 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 B3GNTL1Q67FW5 361 aaPredicted RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 FBXL22Q6P050 247 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 PRSS48Q7RTY5 328 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 MRPL55Q7Z7F7 128 aaKnown RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 KLHDC8BQ8IXV7 354 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 OR52L1Q8NGH7 329 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 FBXO25Q8TCJ0 367 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 CYGBQ8WWM9 190 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 MBD3L1Q8WWY6 194 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 BORCS7Q96B45 105 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 SULT4A1Q9BR01 284 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 SNHG12Q9BXW3 62 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 ULBP3Q9BZM4 244 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 CDC42EP4Q9H3Q1 356 aaKnown RBP3.25□□□□□ -1.89
CLHC1-201ENST00000401408 POPDC3Q9HBV1 291 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 SERTAD4Q9NUC0 356 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 TRAPPC2LQ9UL33 140 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 UGT2A1Q9Y4X1 527 aa3.25□□□□□ -1.89
CLHC1-201ENST00000401408 C15orf62A8K5M9 175 aa3.24□□□□□ -1.89
CLHC1-201ENST00000401408 IGHV2-5P01817 119 aa3.24□□□□□ -1.89
CLHC1-201ENST00000401408 IL3P08700 152 aa3.24□□□□□ -1.89
CLHC1-201ENST00000401408 GKN3PP0CG01 181 aa3.24□□□□□ -1.89
CLHC1-201ENST00000401408 FGF3P11487 239 aaPredicted RBP3.24□□□□□ -1.89
CLHC1-201ENST00000401408 RAB3BP20337 219 aa3.24□□□□□ -1.89
CLHC1-201ENST00000401408 NPY1RP25929 384 aa3.24□□□□□ -1.89
CLHC1-201ENST00000401408 AMTP48728 403 aa3.24□□□□□ -1.89
CLHC1-201ENST00000401408 FABP6P51161 128 aa3.24□□□□□ -1.89
CLHC1-201ENST00000401408 SUB1P53999 127 aaKnown RBP eCLIP3.24□□□□□ -1.89
CLHC1-201ENST00000401408 RPS18P62269 152 aaKnown RBP3.24□□□□□ -1.89
CLHC1-201ENST00000401408 HBA1P69905 142 aa3.24□□□□□ -1.89
CLHC1-201ENST00000401408 HIST1H1AQ02539 215 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms