RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 B2MP61769 119 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 C1orf100Q5SVJ3 147 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 ZNF788Q6ZQV5 615 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 GHITMQ9H3K2 345 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 DNASE2O00115 360 aaPredicted RBP15.74■□□□□ 0.11
COL18A1-204ENST00000400337 HTR1DP28221 377 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 KRTCAP3Q53RY4 240 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 LPAR2Q9HBW0 351 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 VAX2Q9UIW0 290 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 OR2H2O95918 312 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 EGR4Q05215 589 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 LINC01590Q5TEZ4 76 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 SF3B6Q9Y3B4 125 aaKnown RBP15.74■□□□□ 0.11
COL18A1-204ENST00000400337 J3QR06 171 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 ATP6V0CP27449 155 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 HNRNPA3P51991 378 aaKnown RBP15.74■□□□□ 0.11
COL18A1-204ENST00000400337 C1orf174Q8IYL3 243 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 RSRP1Q9BUV0 290 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 MGST3O14880 152 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 MMP7P09237 267 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-204ENST00000400337 RCC1P18754 421 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-204ENST00000400337 NSUN5P2Q63ZY6 315 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 SLC35E3Q7Z769 313 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 CHAC2Q8WUX2 184 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 PAGE4O60829 102 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 HBZP02008 142 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 NHLH2Q02577 135 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 ZNF345Q14585 488 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 OR1L8Q8NGR8 309 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 OR4X1Q8NH49 305 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 ASCL3Q9NQ33 180 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 TCL1AP56279 114 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 SPCS3P61009 180 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 CBLN2Q8IUK8 224 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 MS4A10Q96PG2 267 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 PMS2P11Q13670 270 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 MMDQ15546 238 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 TET1Q8NFU7 2136 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 CCDC88CQ9P219 2028 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 F5H697 171 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 NFAM1Q8NET5 270 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-204ENST00000400337 ABHD14BQ96IU4 210 aa15.73■□□□□ 0.11
COL18A1-204ENST00000400337 SEC11BP0C7V7 166 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 ACP1P24666 158 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 STPG2Q8N412 459 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 OR2T10Q8NGZ9 312 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 PRSS3P2Q8NHM4 247 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 VWCEQ96DN2 955 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 SEC11CQ9BY50 192 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 RAB29O14966 203 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 OR10G8Q8NGN5 311 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 ITLN1Q8WWA0 313 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 SIPA1L1O43166 1804 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 TCAPO15273 167 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 ADRA2AP08913 450 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 RIPPLY2Q5TAB7 128 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 RGP1Q92546 391 aaPredicted RBP15.72■□□□□ 0.11
COL18A1-204ENST00000400337 TEPPQ6URK8 271 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 IFT22Q9H7X7 185 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 G6PC2Q9NQR9 355 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 GPR132Q9UNW8 380 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 GVINP1Q7Z2Y8 2422 aa15.72■□□□□ 0.11
COL18A1-204ENST00000400337 HOXD4P09016 255 aaPredicted RBP15.71■□□□□ 0.11
COL18A1-204ENST00000400337 FAM157CP0CG43 387 aa15.71■□□□□ 0.11
COL18A1-204ENST00000400337 DLK1P80370 383 aa15.71■□□□□ 0.11
COL18A1-204ENST00000400337 PARP11Q9NR21 331 aa15.71■□□□□ 0.11
COL18A1-204ENST00000400337 OR51B2Q9Y5P1 312 aa15.71■□□□□ 0.11
COL18A1-204ENST00000400337 IGHV3-21A0A0B4J1V1 117 aa15.71■□□□□ 0.11
COL18A1-204ENST00000400337 THY1P04216 161 aa15.71■□□□□ 0.11
COL18A1-204ENST00000400337 CXCL2P19875 107 aa15.71■□□□□ 0.11
COL18A1-204ENST00000400337 K7N7A8 449 aa15.71■□□□□ 0.11
COL18A1-204ENST00000400337 WNT2BQ93097 391 aa15.71■□□□□ 0.11
COL18A1-204ENST00000400337 PCGF1Q9BSM1 259 aa15.71■□□□□ 0.11
COL18A1-204ENST00000400337 TRAF4Q9BUZ4 470 aaPredicted RBP15.71■□□□□ 0.11
COL18A1-204ENST00000400337 OR5AC2Q9NZP5 309 aa15.71■□□□□ 0.11
COL18A1-204ENST00000400337 C7orf77A4D0Y5 90 aa15.71■□□□□ 0.1
COL18A1-204ENST00000400337 C10orf113Q5VZT2 155 aa15.71■□□□□ 0.1
COL18A1-204ENST00000400337 LINC00862A6NCI5 91 aa15.7■□□□□ 0.1
COL18A1-204ENST00000400337 NEURL1O76050 574 aa15.7■□□□□ 0.1
COL18A1-204ENST00000400337 HPRT1P00492 218 aa15.7■□□□□ 0.1
COL18A1-204ENST00000400337 MRGPRGQ86SM5 289 aa15.7■□□□□ 0.1
COL18A1-204ENST00000400337 ZNF714Q96N38 554 aa15.7■□□□□ 0.1
COL18A1-204ENST00000400337 FOXJ2Q9P0K8 574 aa15.7■□□□□ 0.1
COL18A1-204ENST00000400337 CEBPDP49716 269 aaPredicted RBP15.7■□□□□ 0.1
COL18A1-204ENST00000400337 UNQ9370/PRO34162Q6UXP9 181 aa15.7■□□□□ 0.1
COL18A1-204ENST00000400337 DPF1Q92782 380 aa15.7■□□□□ 0.1
COL18A1-204ENST00000400337 ELF5Q9UKW6 265 aaPredicted RBP15.7■□□□□ 0.1
COL18A1-204ENST00000400337 LTBRP36941 435 aa15.7■□□□□ 0.1
COL18A1-204ENST00000400337 MPV17P39210 176 aa15.7■□□□□ 0.1
COL18A1-204ENST00000400337 Q8WTZ3 238 aa15.7■□□□□ 0.1
COL18A1-204ENST00000400337 AQP3Q92482 292 aa15.7■□□□□ 0.1
COL18A1-204ENST00000400337 WDR73Q6P4I2 378 aa15.7■□□□□ 0.1
COL18A1-204ENST00000400337 OR8I2Q8N0Y5 310 aa15.7■□□□□ 0.1
COL18A1-204ENST00000400337 TRAV20A0A0B4J274 112 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 GPR6P46095 362 aaPredicted RBP15.69■□□□□ 0.1
COL18A1-204ENST00000400337 AMTP48728 403 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 RUNX1Q01196 453 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 SSX8Q7RTT4 187 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 PPP1R32Q7Z5V6 425 aa15.69■□□□□ 0.1
COL18A1-204ENST00000400337 APCDD1LQ8NCL9 501 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms