RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 SLX1AQ9BQ83 275 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 LINC00470Q9BZP3 86 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 MMP25Q9NPA2 562 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 MRM2Q9UI43 246 aaKnown RBP8.43□□□□□ -1.06
SMAD9-203ENST00000399275 COL11A2P13942 1736 aaPredicted RBP8.42□□□□□ -1.06
SMAD9-203ENST00000399275 PTPRFP10586 1907 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 OR11H12B2RN74 326 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 PMELP40967 661 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 FOXK1P85037 733 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 GAGE5Q13069 117 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 GAGE6Q13070 117 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 OR11H1Q8NG94 326 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 OR11H2Q8NH07 326 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 CHST6Q9GZX3 395 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.42□□□□□ -1.06
SMAD9-203ENST00000399275 NHP2Q9NX24 153 aaKnown RBP8.42□□□□□ -1.06
SMAD9-203ENST00000399275 B4GALT7Q9UBV7 327 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 ICAM5Q9UMF0 924 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 ZNF716A6NP11 495 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 EREGO14944 169 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 ATXN7O15265 892 aaPredicted RBP8.42□□□□□ -1.06
SMAD9-203ENST00000399275 PSG5Q15238 335 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 DCAF12L2Q5VW00 463 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 OR10D3Q8NH80 312 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 TMEM56Q96MV1 263 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 GPR84Q9NQS5 396 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 TRIP11Q15643 1979 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 LOC105371242A0A075B767 164 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 TRAV8-6A0A0B4J262 113 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 PPIAL4CA0A0B4J2A2 164 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 PPIAL4GP0DN37 164 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 CDKN1BP46527 198 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 RND3P61587 244 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 ZNF816Q0VGE8 651 aaPredicted RBP8.42□□□□□ -1.06
SMAD9-203ENST00000399275 GAGE1Q13065 139 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 LHFPL2Q6ZUX7 228 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 YRDCQ86U90 279 aaKnown RBP8.42□□□□□ -1.06
SMAD9-203ENST00000399275 TGIF2LYQ8IUE0 185 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 OR4F17Q8NGA8 305 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 OR4X2Q8NGF9 303 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 BAHD1Q8TBE0 780 aaPredicted RBP8.42□□□□□ -1.06
SMAD9-203ENST00000399275 MFRPQ9BY79 579 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 A0A1W2PR80 420 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 C1QCP02747 245 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 HSD52Q0P140 79 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 TRA2AQ13595 282 aaKnown RBP eCLIP8.42□□□□□ -1.06
SMAD9-203ENST00000399275 ZIC1Q15915 447 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 CDKN3Q16667 212 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 PYY3Q5JQD4 70 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 BATF2Q8N1L9 274 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 C12orf76Q8N812 135 aaPredicted RBP8.42□□□□□ -1.06
SMAD9-203ENST00000399275 HARBI1Q96MB7 349 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 SMOC1Q9H4F8 434 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 SEMA5BQ9P283 1151 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 CACNG5Q9UF02 275 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 RARRES3Q9UL19 164 aa8.42□□□□□ -1.06
SMAD9-203ENST00000399275 NKX6-3A6NJ46 265 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 P04436 131 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 CEACAM1P13688 526 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 LGALS3P17931 250 aaKnown RBP8.41□□□□□ -1.06
SMAD9-203ENST00000399275 MAS1LP35410 378 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 WNT5AP41221 380 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 RPL30P62888 115 aaKnown RBP8.41□□□□□ -1.06
SMAD9-203ENST00000399275 LCN2P80188 198 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 PSMG4Q5JS54 123 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 MRPL43Q8N983 215 aaKnown RBP8.41□□□□□ -1.06
SMAD9-203ENST00000399275 OR5AN1Q8NGI8 311 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 OR1N1Q8NGS0 311 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 ZNF479Q96JC4 524 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 FRRS1LQ9P0K9 344 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 SERGEFQ9UGK8 458 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 NPTNQ9Y639 398 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 TRAV9-2A0A087WT02 112 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 A8MWL6 223 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 B5MCH6 92 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 NDUFA2O43678 99 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 ATP5LO75964 103 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 ZFAND5O76080 213 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 SP1P08047 785 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 CCL5P13501 91 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 DUSP2Q05923 314 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 SRSF5Q13243 272 aaKnown RBP8.41□□□□□ -1.06
SMAD9-203ENST00000399275 PTX4Q96A99 478 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 GNB4Q9HAV0 340 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 SMCHD1A6NHR9 2005 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 M0QZ24 198 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 C1QL1O75973 258 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 NDUFB4O95168 129 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 PRTN3P24158 256 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 RNPS1Q15287 305 aaKnown RBP8.41□□□□□ -1.06
SMAD9-203ENST00000399275 SLC25A26Q70HW3 274 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 SLC25A43Q8WUT9 341 aaPredicted RBP8.41□□□□□ -1.06
SMAD9-203ENST00000399275 TMEM204Q9BSN7 226 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 QTRT1Q9BXR0 403 aaKnown RBP8.41□□□□□ -1.06
SMAD9-203ENST00000399275 PGPEP1LA6NFU8 196 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 CHST1O43916 411 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 HIST1H2BKO60814 126 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 CXorf1O96002 111 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 HIST1H2BJP06899 126 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 UMODP07911 640 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms