RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 SIRPB1O00241 398 aa12.79□□□□□ -0.36
COL25A1-201ENST00000399126 ZNF44P15621 663 aa12.79□□□□□ -0.36
COL25A1-201ENST00000399126 CD40P25942 277 aa12.79□□□□□ -0.36
COL25A1-201ENST00000399126 FABP9Q0Z7S8 132 aa12.79□□□□□ -0.36
COL25A1-201ENST00000399126 SLAQ13239 276 aa12.79□□□□□ -0.36
COL25A1-201ENST00000399126 OR2Z1Q8NG97 314 aa12.79□□□□□ -0.36
COL25A1-201ENST00000399126 TMEM171Q8WVE6 324 aa12.79□□□□□ -0.36
COL25A1-201ENST00000399126 RND1Q92730 232 aa12.79□□□□□ -0.36
COL25A1-201ENST00000399126 GGACTQ9BVM4 153 aa12.79□□□□□ -0.36
COL25A1-201ENST00000399126 CCSO14618 274 aa12.78□□□□□ -0.36
COL25A1-201ENST00000399126 NXPH2O95156 264 aa12.78□□□□□ -0.36
COL25A1-201ENST00000399126 Q6P435 159 aa12.78□□□□□ -0.36
COL25A1-201ENST00000399126 THAP6Q8TBB0 222 aa12.78□□□□□ -0.36
COL25A1-201ENST00000399126 ZNF596Q8TC21 504 aa12.78□□□□□ -0.36
COL25A1-201ENST00000399126 MYOZ1Q9NP98 299 aaPredicted RBP12.78□□□□□ -0.36
COL25A1-201ENST00000399126 NOP16Q9Y3C1 178 aaKnown RBP12.78□□□□□ -0.36
COL25A1-201ENST00000399126 DCHS2Q6V1P9 2916 aa12.78□□□□□ -0.36
COL25A1-201ENST00000399126 TRAV39A0A0B4J263 110 aa12.78□□□□□ -0.36
COL25A1-201ENST00000399126 NAPSAO96009 420 aa12.78□□□□□ -0.36
COL25A1-201ENST00000399126 HEXAP06865 529 aa12.78□□□□□ -0.36
COL25A1-201ENST00000399126 CXCL2P19875 107 aa12.78□□□□□ -0.36
COL25A1-201ENST00000399126 IL13RA1P78552 427 aa12.78□□□□□ -0.36
COL25A1-201ENST00000399126 ETFRF1Q6IPR1 90 aa12.78□□□□□ -0.36
COL25A1-201ENST00000399126 LYG2Q86SG7 212 aa12.78□□□□□ -0.36
COL25A1-201ENST00000399126 PEG10Q86TG7 708 aaKnown RBP12.78□□□□□ -0.36
COL25A1-201ENST00000399126 SELENOHQ8IZQ5 122 aaKnown RBP12.78□□□□□ -0.36
COL25A1-201ENST00000399126 UNKLQ9H9P5 680 aaKnown RBP12.78□□□□□ -0.36
COL25A1-201ENST00000399126 POLDIP2Q9Y2S7 368 aa12.78□□□□□ -0.36
COL25A1-201ENST00000399126 MEMO1Q9Y316 297 aa12.78□□□□□ -0.36
COL25A1-201ENST00000399126 CEACAM18A8MTB9 384 aa12.77□□□□□ -0.36
COL25A1-201ENST00000399126 MCRIP1C9JLW8 97 aa12.77□□□□□ -0.36
COL25A1-201ENST00000399126 FPR2P25090 351 aa12.77□□□□□ -0.36
COL25A1-201ENST00000399126 PAX6P26367 422 aa12.77□□□□□ -0.36
COL25A1-201ENST00000399126 LY6G6FQ5SQ64 297 aa12.77□□□□□ -0.36
COL25A1-201ENST00000399126 TMEM211Q6ICI0 200 aa12.77□□□□□ -0.36
COL25A1-201ENST00000399126 VKORC1Q9BQB6 163 aa12.77□□□□□ -0.36
COL25A1-201ENST00000399126 CXXC4Q9H2H0 198 aa12.77□□□□□ -0.36
COL25A1-201ENST00000399126 ZNF286AQ9HBT8 521 aa12.77□□□□□ -0.36
COL25A1-201ENST00000399126 GFOD1Q9NXC2 390 aa12.77□□□□□ -0.36
COL25A1-201ENST00000399126 OR14J1Q9UGF5 321 aa12.77□□□□□ -0.36
COL25A1-201ENST00000399126 ABCA4P78363 2273 aa12.77□□□□□ -0.36
COL25A1-201ENST00000399126 OR2H2O95918 312 aa12.77□□□□□ -0.37
COL25A1-201ENST00000399126 NFYAP23511 347 aaPredicted RBP12.77□□□□□ -0.37
COL25A1-201ENST00000399126 GLRXP35754 106 aa12.77□□□□□ -0.37
COL25A1-201ENST00000399126 SUPT4H1P63272 117 aaKnown RBP12.77□□□□□ -0.37
COL25A1-201ENST00000399126 WDR82Q6UXN9 313 aa12.77□□□□□ -0.37
COL25A1-201ENST00000399126 OR10J5Q8NHC4 309 aa12.77□□□□□ -0.37
COL25A1-201ENST00000399126 PLK3Q9H4B4 646 aa12.77□□□□□ -0.37
COL25A1-201ENST00000399126 NECAP2Q9NVZ3 263 aa12.77□□□□□ -0.37
COL25A1-201ENST00000399126 ELOVL5Q9NYP7 299 aa12.77□□□□□ -0.37
COL25A1-201ENST00000399126 IGSF10Q6WRI0 2623 aa12.77□□□□□ -0.37
COL25A1-201ENST00000399126 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.76□□□□□ -0.37
COL25A1-201ENST00000399126 MED19A0JLT2 244 aaPredicted RBP12.76□□□□□ -0.37
COL25A1-201ENST00000399126 PLSCR5A0PG75 271 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 DEGS1O15121 323 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 OR2A4O95047 310 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 KNG1P01042 644 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 SCTP09683 121 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 CD34P28906 385 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 FXYD4P59646 89 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 IL13RA2Q14627 380 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 TOMM40LQ969M1 308 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 OR2A7Q96R45 310 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 DPRXA6NFQ7 191 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 IFNA2P01563 188 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 RCC1P18754 421 aaPredicted RBP12.76□□□□□ -0.37
COL25A1-201ENST00000399126 FCGR2CP31995 323 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 KLF3P57682 345 aaPredicted RBP12.76□□□□□ -0.37
COL25A1-201ENST00000399126 NUTF2P61970 127 aaKnown RBP12.76□□□□□ -0.37
COL25A1-201ENST00000399126 SLC9A3R2Q15599 337 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 ZNF383Q8NA42 475 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 MRPL30Q8TCC3 161 aaKnown RBP12.76□□□□□ -0.37
COL25A1-201ENST00000399126 SLC25A32Q9H2D1 315 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 PRORYQ9H606 182 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 Q9N2K0 584 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 OPN4Q9UHM6 478 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 COL12A1Q99715 3063 aa12.76□□□□□ -0.37
COL25A1-201ENST00000399126 SLC33A1O00400 549 aaPredicted RBP12.75□□□□□ -0.37
COL25A1-201ENST00000399126 IGHV3-13P01766 116 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 PGAM2P15259 253 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 PPP3CBP16298 524 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 PMELP40967 661 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 HERPUD1Q15011 391 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 C3orf36Q3SXR2 165 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 UQCC3Q6UW78 93 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 KCTD9Q7L273 389 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 PLPPR1Q8TBJ4 325 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 MISP3Q96FF7 219 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 POMT1Q9Y6A1 747 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 SPRY3O43610 288 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 GIPP09681 153 aaPredicted RBP12.75□□□□□ -0.37
COL25A1-201ENST00000399126 BSPH1Q075Z2 132 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 ATXN7L3Q14CW9 347 aaPredicted RBP12.75□□□□□ -0.37
COL25A1-201ENST00000399126 CDSNQ15517 529 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 CLEC18BQ6UXF7 455 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 LINC00596Q86U02 117 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 POC1AQ8NBT0 407 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 WFIKKN1Q96NZ8 548 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 FXYD6Q9H0Q3 95 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 TLNRD1Q9H1K6 362 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms