RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 DUSP21Q9H596 190 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 TAF9BQ9HBM6 251 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 OR2S2Q9NQN1 319 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 MBNL3Q9NUK0 354 aaKnown RBP10.63□□□□□ -0.71
VCX3A-202ENST00000398729 NCBP2LA6PVI3 153 aaKnown RBP10.62□□□□□ -0.71
VCX3A-202ENST00000398729 SERPINE3A8MV23 424 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 SLC31A2O15432 143 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 RGS10O43665 173 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 PF4P02776 101 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 UCHL1P09936 223 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 HSMCR30P0CW71 290 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 VSIG8P0DPA2 414 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 HTR2CP28335 458 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 CD1BP29016 333 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 ZNF137PP52743 207 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 CT45A1Q5HYN5 189 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 OR10K2Q6IF99 312 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 C10orf99Q6UWK7 81 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 SLC35E3Q7Z769 313 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 TGIF2LXQ8IUE1 241 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 FOXRED2Q8IWF2 684 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 ZNF439Q8NDP4 499 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 CT45A3Q8NHU0 189 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 KCNG3Q8TAE7 436 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 MRPL30Q8TCC3 161 aaKnown RBP10.62□□□□□ -0.71
VCX3A-202ENST00000398729 CHPT1Q8WUD6 406 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 TMEM203Q969S6 136 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 TMEM59Q9BXS4 323 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 CCDC90BQ9GZT6 254 aa10.62□□□□□ -0.71
VCX3A-202ENST00000398729 SLC22A1O15245 554 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 MOSP00540 346 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 IGHG2P01859 326 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 PSMA1P25786 263 aaKnown RBP10.61□□□□□ -0.71
VCX3A-202ENST00000398729 CHATP28329 748 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 ZNF134P52741 427 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 RPS27AP62979 156 aaKnown RBP10.61□□□□□ -0.71
VCX3A-202ENST00000398729 SLC35B1P78383 322 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 TPBGQ13641 420 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 TRAM1Q15629 374 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 MORN2Q502X0 79 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 REC114Q7Z4M0 266 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 ZNF329Q86UD4 541 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 Q8N6K4 173 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 OR6M1Q8NGM8 313 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 MRAPQ8TCY5 172 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 NOL4LQ96MY1 436 aaPredicted RBP10.61□□□□□ -0.71
VCX3A-202ENST00000398729 ISYNA1Q9NPH2 558 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 JPT1Q9UK76 154 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 LRRC42Q9Y546 428 aa10.61□□□□□ -0.71
VCX3A-202ENST00000398729 BPNT1O95861 308 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 CD37P11049 281 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 CRHBPP24387 322 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 HSPA13P48723 471 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 HTD2P86397 168 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 MLLT11Q13015 90 aaPredicted RBP10.6□□□□□ -0.71
VCX3A-202ENST00000398729 PRSS48Q7RTY5 328 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 C6orf201Q7Z4U5 140 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 WFDC9Q8NEX5 89 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 OR8H1Q8NGG4 311 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 OR52L2PQ8NGH6 319 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 GALMQ96C23 342 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 CYYR1Q96J86 154 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 SULT4A1Q9BR01 284 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 FAAP24Q9BTP7 215 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 TM2D1Q9BX74 207 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 ABCG5Q9H222 651 aa10.6□□□□□ -0.71
VCX3A-202ENST00000398729 LIN7CQ9NUP9 197 aaKnown RBP10.6□□□□□ -0.71
VCX3A-202ENST00000398729 TMEM14DPA8MWL7 114 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 AP4M1O00189 453 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 LANCL1O43813 399 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 YPEL1O60688 119 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 ARL6IP5O75915 188 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 RGS11O94810 467 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 CPEP16870 476 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 BLVRBP30043 206 aaPredicted RBP10.59□□□□□ -0.71
VCX3A-202ENST00000398729 RPS25P62851 125 aaKnown RBP10.59□□□□□ -0.71
VCX3A-202ENST00000398729 QRFPP83859 136 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 UNC119Q13432 240 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 GNMTQ14749 295 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 IZUMO2Q6UXV1 221 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 TMEM91Q6ZNR0 172 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 STPG2Q8N412 459 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 COMMD1Q8N668 190 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 Q8N9W7 124 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 PHF21AQ96BD5 680 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 YPEL2Q96QA6 119 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 RASL11BQ9BPW5 248 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 NICN1Q9BSH3 213 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 URM1Q9BTM9 101 aaKnown RBP10.59□□□□□ -0.71
VCX3A-202ENST00000398729 ABHD14AQ9BUJ0 271 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 KCNK15Q9H427 330 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 PLGRKTQ9HBL7 147 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 CHMP1AQ9HD42 196 aaPredicted RBP10.59□□□□□ -0.71
VCX3A-202ENST00000398729 NECAP2Q9NVZ3 263 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 PLEKHJ1Q9NW61 149 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 ABRACLQ9P1F3 81 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 LINC00527Q9UJ94 153 aa10.59□□□□□ -0.71
VCX3A-202ENST00000398729 ZNF736B4DX44 427 aaPredicted RBP10.58□□□□□ -0.72
VCX3A-202ENST00000398729 SLC17A2O00624 439 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 IGLL1P15814 213 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms