RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 C2orf16Q68DN1 1984 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 DEGS1O15121 323 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 JTBO76095 146 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 OR2B8PP59922 312 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 TGIF1Q15583 401 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 BTNL8Q6UX41 500 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 FAM89BQ8N5H3 189 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 SFT2D1Q8WV19 159 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 TP53RKQ96S44 253 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 PLEKHF2Q9H8W4 249 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 PSENENQ9NZ42 101 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 HSPB7Q9UBY9 170 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 PRSS2P07478 247 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 FGF5P12034 268 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 MPZP25189 248 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 RBM11P57052 281 aaKnown RBP4.26□□□□□ -1.73
SMAD4-202ENST00000398417 FAM209BQ5JX69 171 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 OR2C3Q8N628 320 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 MS4A5Q9H3V2 200 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 SLC39A9Q9NUM3 307 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 URGCP-MRPS24S4R325 110 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 NCOR1O75376 2440 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 LRRC30A6NM36 301 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 TK1P04183 234 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 H2AFB1P0C5Y9 115 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 SUPT4H1P63272 117 aaKnown RBP4.26□□□□□ -1.73
SMAD4-202ENST00000398417 PMP22Q01453 160 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 HABP2Q14520 560 aaPredicted RBP4.26□□□□□ -1.73
SMAD4-202ENST00000398417 MALSU1Q96EH3 234 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 AQP10Q96PS8 301 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 IER2Q9BTL4 223 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 GCM1Q9NP62 436 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 NGBQ9NPG2 151 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 CACFD1Q9UGQ2 172 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 FOXH1O75593 365 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 MT-CO2P00403 227 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 MT-CO3P00414 261 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF17P17021 662 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 FAM3AP98173 230 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 PPP1R32Q7Z5V6 425 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 TMEM252Q8N6L7 170 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 CNEP1R1Q8N9A8 125 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 HIST1H2BAQ96A08 127 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 WFIKKN1Q96NZ8 548 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 HS3ST6Q96QI5 342 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 RTL8AQ9BWD3 113 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 MMP24Q9Y5R2 645 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 ZFP92A6NM28 416 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 CEBPZOSA8MTT3 80 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF705FA8MVS1 300 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 AQP7O14520 342 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 TERTO14746 1132 aaKnown RBP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 SYNGR3O43761 229 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 PRSS1P07477 247 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF705DP0CH99 300 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF705BP0CI00 300 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 MGST1P10620 155 aaKnown RBP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 CCL1P22362 96 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 ATP6V0CP27449 155 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 IL2RGP31785 369 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 CCL11P51671 97 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 RAC3P60763 192 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 CCL20P78556 96 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 SPINK9Q5DT21 86 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 SLC23A3Q6PIS1 610 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 DTD1Q8TEA8 209 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 NANOS1Q8WY41 292 aaKnown RBP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 NTNG2Q96CW9 530 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 FBLN5Q9UBX5 448 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 PRSS50Q9UI38 385 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 ARHGAP21Q5T5U3 1957 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 SDK2Q58EX2 2172 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 IGKV1-27A0A075B6S5 117 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 F8VVB4 439 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 F8VWA3 439 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 H7BYZ3 331 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 CHST1O43916 411 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 HLA-GP17693 338 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 GNB1P62873 340 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 BAXQ07812 192 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 TRA2AQ13595 282 aaKnown RBP eCLIP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 HIKESHIQ53FT3 197 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 CPEB3Q8NE35 698 aaKnown RBP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 IP6K3Q96PC2 410 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 SEC11CQ9BY50 192 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 ZDHHC11Q9H8X9 412 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 PILRBQ9UKJ0 227 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 FZR1Q9UM11 496 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 OR5H1A6NKK0 313 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 NTF3P20783 257 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 CRYGSP22914 178 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 ZXDAP98168 799 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 SPANXN5Q5MJ07 72 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 LYPD6Q86Y78 171 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 OR1J1Q8NGS3 322 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 TM2D1Q9BX74 207 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 SEMA5BQ9P283 1151 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 CDC42EP3Q9UKI2 254 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 PQLC2LA1A4F0 135 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 PPYP01298 95 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms