RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 TOMM40LQ969M1 308 aa11.49□□□□□ -0.57
HDDC2-202ENST00000398153 RAB3CQ96E17 227 aa11.49□□□□□ -0.57
HDDC2-202ENST00000398153 PECRQ9BY49 303 aa11.49□□□□□ -0.57
HDDC2-202ENST00000398153 C12orf4Q9NQ89 552 aa11.49□□□□□ -0.57
HDDC2-202ENST00000398153 OR2S2Q9NQN1 319 aa11.49□□□□□ -0.57
HDDC2-202ENST00000398153 RNF114Q9Y508 228 aa11.49□□□□□ -0.57
HDDC2-202ENST00000398153 LOC100506127A0A0U1RQW1 187 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 SERPINE3A8MV23 424 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 TXNL1O43396 289 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 YPEL1O60688 119 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 GAPDHP04406 335 aaKnown RBP11.48□□□□□ -0.57
HDDC2-202ENST00000398153 FAM106CPP0CH98 169 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 PAX6P26367 422 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 RAB13P51153 203 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 ZNF137PP52743 207 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 MRPS15P82914 257 aaKnown RBP11.48□□□□□ -0.57
HDDC2-202ENST00000398153 MORN2Q502X0 79 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 PLA1AQ53H76 456 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 PRR18Q8N4B5 295 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 LEAP2Q969E1 77 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 YIPF6Q96EC8 236 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 ARHGAP5-AS1Q96IT6 56 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 YPEL2Q96QA6 119 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 GHITMQ9H3K2 345 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 CHMP1AQ9HD42 196 aaPredicted RBP11.48□□□□□ -0.57
HDDC2-202ENST00000398153 AK3Q9UIJ7 227 aa11.48□□□□□ -0.57
HDDC2-202ENST00000398153 FAM90A9PA6NNJ1 464 aa11.47□□□□□ -0.57
HDDC2-202ENST00000398153 M0QZK8 103 aa11.47□□□□□ -0.57
HDDC2-202ENST00000398153 HAX1O00165 279 aa11.47□□□□□ -0.57
HDDC2-202ENST00000398153 RAB27BO00194 218 aa11.47□□□□□ -0.57
HDDC2-202ENST00000398153 AIREO43918 545 aa11.47□□□□□ -0.57
HDDC2-202ENST00000398153 GNG10P50151 68 aa11.47□□□□□ -0.57
HDDC2-202ENST00000398153 HABP2Q14520 560 aaPredicted RBP11.47□□□□□ -0.57
HDDC2-202ENST00000398153 PLAC9Q5JTB6 97 aa11.47□□□□□ -0.57
HDDC2-202ENST00000398153 UTF1Q5T230 341 aa11.47□□□□□ -0.57
HDDC2-202ENST00000398153 CCBE1Q6UXH8 406 aaPredicted RBP11.47□□□□□ -0.57
HDDC2-202ENST00000398153 ZNF439Q8NDP4 499 aa11.47□□□□□ -0.57
HDDC2-202ENST00000398153 OR1L1Q8NH94 360 aa11.47□□□□□ -0.57
HDDC2-202ENST00000398153 OR2T6Q8NHC8 308 aa11.47□□□□□ -0.57
HDDC2-202ENST00000398153 SGMS2Q8NHU3 365 aa11.47□□□□□ -0.57
HDDC2-202ENST00000398153 CMSS1Q9BQ75 279 aaKnown RBP11.47□□□□□ -0.57
HDDC2-202ENST00000398153 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.47□□□□□ -0.57
HDDC2-202ENST00000398153 DAPK2Q9UIK4 370 aa11.47□□□□□ -0.57
HDDC2-202ENST00000398153 ETV7Q9Y603 341 aa11.47□□□□□ -0.57
HDDC2-202ENST00000398153 ITGB1BP1O14713 200 aa11.46□□□□□ -0.57
HDDC2-202ENST00000398153 HSD17B6O14756 317 aa11.46□□□□□ -0.57
HDDC2-202ENST00000398153 CHST1O43916 411 aa11.46□□□□□ -0.57
HDDC2-202ENST00000398153 OR2F2O95006 317 aa11.46□□□□□ -0.57
HDDC2-202ENST00000398153 DIRAS3O95661 229 aa11.46□□□□□ -0.57
HDDC2-202ENST00000398153 IGHV3-7P01780 117 aa11.46□□□□□ -0.57
HDDC2-202ENST00000398153 CD3GP09693 182 aa11.46□□□□□ -0.57
HDDC2-202ENST00000398153 SLC2A2P11168 524 aaPredicted RBP11.46□□□□□ -0.57
HDDC2-202ENST00000398153 PROK1P58294 105 aa11.46□□□□□ -0.57
HDDC2-202ENST00000398153 SRSF7Q16629 238 aaKnown RBP eCLIP11.46□□□□□ -0.57
HDDC2-202ENST00000398153 Q8N2B8 174 aa11.46□□□□□ -0.57
HDDC2-202ENST00000398153 CAPSLQ8WWF8 208 aa11.46□□□□□ -0.57
HDDC2-202ENST00000398153 WFDC12Q8WWY7 111 aa11.46□□□□□ -0.57
HDDC2-202ENST00000398153 ST6GALNAC6Q969X2 333 aa11.46□□□□□ -0.57
HDDC2-202ENST00000398153 RBM14Q96PK6 669 aaKnown RBP11.46□□□□□ -0.57
HDDC2-202ENST00000398153 PRSS22Q9GZN4 317 aa11.46□□□□□ -0.57
HDDC2-202ENST00000398153 Q9N2K0 584 aa11.46□□□□□ -0.57
HDDC2-202ENST00000398153 A0A0A6YYH2 397 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 IGHV3-43A0A0B4J1X8 118 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 A0A1W2PPI3 338 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 A6NJ64 397 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 MFNGO00587 321 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 IGHV3-43DP0DP04 118 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 HIST1H1DP16402 221 aaKnown RBP11.45□□□□□ -0.58
HDDC2-202ENST00000398153 ZBTB25P24278 435 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 ZNF134P52741 427 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 EFNB2P52799 333 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 MXD1Q05195 221 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 CT45A1Q5HYN5 189 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 CT45A3Q8NHU0 189 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 UBALD1Q8TB05 177 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 CFHR4Q92496 578 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 ATG5Q9H1Y0 275 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 KCNK7Q9Y2U2 307 aa11.45□□□□□ -0.58
HDDC2-202ENST00000398153 IGHV1-3A0A0C4DH29 117 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 A0A1W2PPE3 182 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 TRDCB7Z8K6 153 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 TIMM23O14925 209 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 LANCL1O43813 399 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 CD1BP29016 333 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 SERPINB10P48595 397 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 HLA-DRB3P79483 266 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 PITPNAQ00169 270 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 PLA2G7Q13093 441 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 EBI3Q14213 229 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 KIR2DS1Q14954 304 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 MOGAT2Q3SYC2 334 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 FAM71F2Q6NXP2 309 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 TMEM219Q86XT9 240 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 OR2AK2Q8NG84 335 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 OR13F1Q8NGS4 319 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 SETD6Q8TBK2 473 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 RTN4IP1Q8WWV3 396 aaPredicted RBP11.44□□□□□ -0.58
HDDC2-202ENST00000398153 IL1F10Q8WWZ1 152 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 EDARADDQ8WWZ3 215 aa11.44□□□□□ -0.58
HDDC2-202ENST00000398153 TAF15Q92804 592 aaKnown RBP eCLIP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms