RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 IGKV1D-8A0A087WSZ0 117 aa16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 SRRM5B3KS81 715 aa16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 DEGS1O15121 323 aa16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 HOXB5P09067 269 aa16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 H2AFB1P0C5Y9 115 aa16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 PJVKQ0ZLH3 352 aa16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 IAH1Q2TAA2 248 aaPredicted RBP16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 SPIN3Q5JUX0 258 aa16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 BOLLQ8N9W6 283 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 OR11L1Q8NGX0 322 aa16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 Q8TCH9 128 aa16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 MAFIPQ8WZ33 124 aa16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 TSNAXQ99598 290 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 PLEKHA2Q9HB19 425 aa16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 CBLN4Q9NTU7 201 aa16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 RNF7Q9UBF6 113 aa16.21■□□□□ 0.19
PDLIM2-204ENST00000397760 SH2D1BO14796 132 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 KCNAB3O43448 404 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 DEDDO75618 318 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 JTBO76095 146 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 LHBP01229 141 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 FCGR3AP08637 254 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 HKR1P10072 659 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 ZNF44P15621 663 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 EGR1P18146 543 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 UCP3P55916 312 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 BLOC1S1P78537 153 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 SMIM21Q3B7S5 101 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 Q6P435 159 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 SPAG16Q8N0X2 631 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 SUCNR1Q9BXA5 334 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 SPACA1Q9HBV2 294 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 RCC2Q9P258 522 aaKnown RBP16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 OR14J1Q9UGF5 321 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 AK3Q9UIJ7 227 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 POMT1Q9Y6A1 747 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 FAM208BQ5VWN6 2430 aa16.2■□□□□ 0.18
PDLIM2-204ENST00000397760 GOSR1O95249 250 aa16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 PLA2G2AP14555 144 aa16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 SEC11CQ9BY50 192 aa16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 IFT22Q9H7X7 185 aa16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 GSKIPQ9P0R6 139 aa16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 DOPEY1Q5JWR5 2465 aa16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 ZNF705EA8MWA4 302 aaPredicted RBP16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 OR2H2O95918 312 aa16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 SOD3P08294 240 aa16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 DANCRP0C864 163 aa16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 IRF2P14316 349 aa16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 PPOXP50336 477 aa16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 TGIF2LYQ8IUE0 185 aa16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 SUMF2Q8NBJ7 301 aa16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 TAF9BQ9HBM6 251 aa16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 PRR13Q9NZ81 148 aa16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 FBXO9Q9UK97 447 aaPredicted RBP16.19■□□□□ 0.18
PDLIM2-204ENST00000397760 CHD6Q8TD26 2715 aa16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 TRAV24A0A0B4J272 114 aa16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 K7EPK0 472 aa16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 HSPB6O14558 160 aa16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 HAND1O96004 215 aa16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 CYB5R3P00387 301 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 ZNF728P0DKX0 622 aa16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 RPL12P30050 165 aaKnown RBP16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 SULT1A2P50226 295 aa16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 S100A10P60903 97 aa16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 C11orf71Q6IPW1 123 aa16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 FAM71E2Q8N5Q1 922 aa16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 DYRK2Q92630 601 aa16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 RDH5Q92781 318 aa16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 HDHD3Q9BSH5 251 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 NAA60Q9H7X0 242 aa16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 UBTD1Q9HAC8 227 aa16.18■□□□□ 0.18
PDLIM2-204ENST00000397760 J3QKU1 62 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 SIRPB1O00241 398 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 CEBPDP49716 269 aaPredicted RBP16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 CAV2P51636 162 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 TMEM268Q5VZI3 342 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 GGNBP1Q5YKI7 109 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 DTX2Q86UW9 622 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 FAM90A1Q86YD7 464 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 ZNF286AQ9HBT8 521 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 PRELID1Q9Y255 219 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 ABCA4P78363 2273 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 PKDREJQ9NTG1 2253 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 FAM221AA4D161 298 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 LRRC30A6NM36 301 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 SNAPINO95295 136 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 CLDN1O95832 211 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 GLAP06280 429 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 CD80P33681 288 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 PIGPP57054 158 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 SRSF7Q16629 238 aaKnown RBP eCLIP16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 FAM201AQ5SY85 155 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 NEK7Q8TDX7 302 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 PARP11Q9NR21 331 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 DCAF16Q9NXF7 216 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 LAMP3Q9UQV4 416 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 WIPI2Q9Y4P8 454 aa16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 UBR5O95071 2799 aaPredicted RBP16.17■□□□□ 0.18
PDLIM2-204ENST00000397760 MYO18BQ8IUG5 2567 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms