RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 CHPT1Q8WUD6 406 aa12.69□□□□□ -0.38
CUX2-202ENST00000397643 RAX2Q96IS3 184 aa12.69□□□□□ -0.38
CUX2-202ENST00000397643 DCSTAMPQ9H295 470 aa12.69□□□□□ -0.38
CUX2-202ENST00000397643 ZFP57Q9NU63 452 aa12.69□□□□□ -0.38
CUX2-202ENST00000397643 RBFOX1Q9NWB1 397 aaKnown RBP12.69□□□□□ -0.38
CUX2-202ENST00000397643 IL36GQ9NZH8 169 aa12.69□□□□□ -0.38
CUX2-202ENST00000397643 RSL24D1Q9UHA3 163 aaKnown RBP12.69□□□□□ -0.38
CUX2-202ENST00000397643 STEAP1Q9UHE8 339 aa12.69□□□□□ -0.38
CUX2-202ENST00000397643 A0A087X0M5 115 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 A0A1B0GX30 115 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 DPPA5A6NC42 116 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 TMEM127O75204 238 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 HTR3BO95264 441 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 BPNT1O95861 308 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 ARSBP15848 533 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 P2RY14Q15391 338 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 SLC22A6Q4U2R8 563 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 ELP2Q6IA86 826 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 NR2C2APQ86WQ0 139 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 FAM58AQ8N1B3 248 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 C5orf56Q8N8D9 126 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 MUC7Q8TAX7 377 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 CORO2AQ92828 525 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 RBM38Q9H0Z9 239 aaKnown RBP12.68□□□□□ -0.38
CUX2-202ENST00000397643 CST11Q9H112 138 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 GAL3ST2Q9H3Q3 398 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 HMG20AQ9NP66 347 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 GLS2Q9UI32 602 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 DAPK2Q9UIK4 370 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 STARD9Q9P2P6 4700 aa12.68□□□□□ -0.38
CUX2-202ENST00000397643 OOSP1A8MZH6 123 aa12.67□□□□□ -0.38
CUX2-202ENST00000397643 H3BMQ9 156 aa12.67□□□□□ -0.38
CUX2-202ENST00000397643 ZNF701M0R085 212 aaPredicted RBP12.67□□□□□ -0.38
CUX2-202ENST00000397643 GTF2F2P13984 249 aa12.67□□□□□ -0.38
CUX2-202ENST00000397643 PRKACAP17612 351 aa12.67□□□□□ -0.38
CUX2-202ENST00000397643 CEACAM3P40198 252 aa12.67□□□□□ -0.38
CUX2-202ENST00000397643 RORCP51449 518 aa12.67□□□□□ -0.38
CUX2-202ENST00000397643 SPCS2Q15005 226 aa12.67□□□□□ -0.38
CUX2-202ENST00000397643 IDNKQ5T6J7 187 aa12.67□□□□□ -0.38
CUX2-202ENST00000397643 ZNF695Q8IW36 515 aa12.67□□□□□ -0.38
CUX2-202ENST00000397643 Q8NFD4 153 aa12.67□□□□□ -0.38
CUX2-202ENST00000397643 OR10K1Q8NGX5 313 aa12.67□□□□□ -0.38
CUX2-202ENST00000397643 SLC25A46Q96AG3 418 aa12.67□□□□□ -0.38
CUX2-202ENST00000397643 FAM3DQ96BQ1 224 aa12.67□□□□□ -0.38
CUX2-202ENST00000397643 MRPS24Q96EL2 167 aaKnown RBP12.67□□□□□ -0.38
CUX2-202ENST00000397643 GAR1Q9NY12 217 aaKnown RBP12.67□□□□□ -0.38
CUX2-202ENST00000397643 TAS2R3Q9NYW6 316 aa12.67□□□□□ -0.38
CUX2-202ENST00000397643 LINC00527Q9UJ94 153 aa12.67□□□□□ -0.38
CUX2-202ENST00000397643 TRGV10A0A0A0MS01 117 aa12.66□□□□□ -0.38
CUX2-202ENST00000397643 CCL24O00175 119 aa12.66□□□□□ -0.38
CUX2-202ENST00000397643 CRTAPO75718 401 aaPredicted RBP12.66□□□□□ -0.38
CUX2-202ENST00000397643 FAM106CPP0CH98 169 aa12.66□□□□□ -0.38
CUX2-202ENST00000397643 CALCBP10092 127 aa12.66□□□□□ -0.38
CUX2-202ENST00000397643 SLC2A2P11168 524 aaPredicted RBP12.66□□□□□ -0.38
CUX2-202ENST00000397643 SERPINA2P20848 420 aa12.66□□□□□ -0.38
CUX2-202ENST00000397643 MNDAP41218 407 aa12.66□□□□□ -0.38
CUX2-202ENST00000397643 GLIPR1P48060 266 aa12.66□□□□□ -0.38
CUX2-202ENST00000397643 CLDN12P56749 244 aa12.66□□□□□ -0.38
CUX2-202ENST00000397643 C2orf76Q3KRA6 126 aa12.66□□□□□ -0.38
CUX2-202ENST00000397643 CCDC144NLQ6NUI1 221 aa12.66□□□□□ -0.38
CUX2-202ENST00000397643 THNSL2Q86YJ6 484 aa12.66□□□□□ -0.38
CUX2-202ENST00000397643 KCNG3Q8TAE7 436 aa12.66□□□□□ -0.38
CUX2-202ENST00000397643 CREB3L1Q96BA8 519 aa12.66□□□□□ -0.38
CUX2-202ENST00000397643 DGCR14Q96DF8 476 aaKnown RBP12.66□□□□□ -0.38
CUX2-202ENST00000397643 BATF3Q9NR55 127 aa12.66□□□□□ -0.38
CUX2-202ENST00000397643 A0A1W2PPI3 338 aa12.65□□□□□ -0.38
CUX2-202ENST00000397643 SERPINE3A8MV23 424 aa12.65□□□□□ -0.38
CUX2-202ENST00000397643 SIRPB1O00241 398 aa12.65□□□□□ -0.38
CUX2-202ENST00000397643 CHATP28329 748 aa12.65□□□□□ -0.38
CUX2-202ENST00000397643 SOX6P35712 828 aa12.65□□□□□ -0.38
CUX2-202ENST00000397643 SNU13P55769 128 aaKnown RBP12.65□□□□□ -0.38
CUX2-202ENST00000397643 AESQ08117 197 aa12.65□□□□□ -0.38
CUX2-202ENST00000397643 DEFB136Q30KP8 78 aa12.65□□□□□ -0.38
CUX2-202ENST00000397643 SPIN3Q5JUX0 258 aa12.65□□□□□ -0.38
CUX2-202ENST00000397643 OR56B4Q8NH76 319 aa12.65□□□□□ -0.38
CUX2-202ENST00000397643 TMEM14DPA8MWL7 114 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 TOR1AO14656 332 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 SH2D1BO14796 132 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 FGF16O43320 207 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 OR2H2O95918 312 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 IGHG2P01859 326 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 MGMTP16455 207 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 RAB25P57735 213 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 RBM39Q14498 530 aaKnown RBP12.64□□□□□ -0.39
CUX2-202ENST00000397643 IL13RA2Q14627 380 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 C17orf58Q2M2W7 97 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 NHLRC3Q5JS37 347 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 C9orf66Q5T8R8 295 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 STPG2Q8N412 459 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 COMMD1Q8N668 190 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 OR51T1Q8NGJ9 327 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 AP3S1Q92572 193 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 KCTD12Q96CX2 325 aaKnown RBP12.64□□□□□ -0.39
CUX2-202ENST00000397643 COQ2Q96H96 371 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 URM1Q9BTM9 101 aaKnown RBP12.64□□□□□ -0.39
CUX2-202ENST00000397643 SELENOIQ9C0D9 397 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 BANF2Q9H503 90 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 ABRACLQ9P1F3 81 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 RAB22AQ9UL26 194 aa12.64□□□□□ -0.39
CUX2-202ENST00000397643 ST3GAL6Q9Y274 331 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms