RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 H0Y980 276 aa11.44□□□□□ -0.58
SEC13-206ENST00000397102 GEMIN2O14893 280 aaKnown RBP11.44□□□□□ -0.58
SEC13-206ENST00000397102 MT-ND4P03905 459 aa11.44□□□□□ -0.58
SEC13-206ENST00000397102 RPSAP08865 295 aaKnown RBP11.44□□□□□ -0.58
SEC13-206ENST00000397102 RAB3AP20336 220 aa11.44□□□□□ -0.58
SEC13-206ENST00000397102 RAB40BQ12829 278 aa11.44□□□□□ -0.58
SEC13-206ENST00000397102 FLOT2Q14254 428 aa11.44□□□□□ -0.58
SEC13-206ENST00000397102 MPV17LQ2QL34 196 aa11.44□□□□□ -0.58
SEC13-206ENST00000397102 ZNF660Q6AZW8 331 aaPredicted RBP11.44□□□□□ -0.58
SEC13-206ENST00000397102 OR52N1Q8NH53 320 aa11.44□□□□□ -0.58
SEC13-206ENST00000397102 NEK7Q8TDX7 302 aa11.44□□□□□ -0.58
SEC13-206ENST00000397102 LINC00476Q8WZB0 136 aa11.44□□□□□ -0.58
SEC13-206ENST00000397102 TMED9Q9BVK6 235 aa11.44□□□□□ -0.58
SEC13-206ENST00000397102 RETNQ9HD89 108 aa11.44□□□□□ -0.58
SEC13-206ENST00000397102 IL36GQ9NZH8 169 aa11.44□□□□□ -0.58
SEC13-206ENST00000397102 J3QLW9 94 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 J3QRE1 110 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 SLC25A17O43808 307 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 ZNF19P17023 458 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 LRRC36Q1X8D7 754 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 ATAD3CQ5T2N8 411 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 ZNF529Q6P280 563 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 CD200R1LQ6Q8B3 271 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 GTSCR1Q86UQ5 136 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 STX19Q8N4C7 294 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 OR51A2Q8NGJ7 313 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 C4orf36Q96KX1 117 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 RHOVQ96L33 236 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 NABP2Q9BQ15 211 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 FAM110AQ9BQ89 295 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 THAP7Q9BT49 309 aaPredicted RBP11.43□□□□□ -0.58
SEC13-206ENST00000397102 MRPL20Q9BYC9 149 aaKnown RBP11.43□□□□□ -0.58
SEC13-206ENST00000397102 METTL9Q9H1A3 318 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 HIPK2Q9H2X6 1198 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 RIBC2Q9H4K1 309 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 DHDHQ9UQ10 334 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 NUBP2Q9Y5Y2 271 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 FRAS1Q86XX4 4008 aa11.43□□□□□ -0.58
SEC13-206ENST00000397102 G3V2T6 193 aa11.42□□□□□ -0.58
SEC13-206ENST00000397102 RGS11O94810 467 aa11.42□□□□□ -0.58
SEC13-206ENST00000397102 CDRT1O95170 752 aa11.42□□□□□ -0.58
SEC13-206ENST00000397102 HBZP02008 142 aa11.42□□□□□ -0.58
SEC13-206ENST00000397102 T-ENOLP0DO92 83 aa11.42□□□□□ -0.58
SEC13-206ENST00000397102 TPPP2P59282 170 aa11.42□□□□□ -0.58
SEC13-206ENST00000397102 TMEM267Q0VDI3 215 aaPredicted RBP11.42□□□□□ -0.58
SEC13-206ENST00000397102 C6orf183Q5T699 404 aa11.42□□□□□ -0.58
SEC13-206ENST00000397102 SYT6Q5T7P8 510 aaPredicted RBP11.42□□□□□ -0.58
SEC13-206ENST00000397102 PRR18Q8N4B5 295 aa11.42□□□□□ -0.58
SEC13-206ENST00000397102 TSEN15Q8WW01 171 aaKnown RBP11.42□□□□□ -0.58
SEC13-206ENST00000397102 GABARAPL1Q9H0R8 117 aa11.42□□□□□ -0.58
SEC13-206ENST00000397102 SLA2Q9H6Q3 261 aa11.42□□□□□ -0.58
SEC13-206ENST00000397102 TRAPPC2LQ9UL33 140 aa11.42□□□□□ -0.58
SEC13-206ENST00000397102 RNF150Q9ULK6 438 aa11.42□□□□□ -0.58
SEC13-206ENST00000397102 CEPT1Q9Y6K0 416 aa11.42□□□□□ -0.58
SEC13-206ENST00000397102 A3GALT2U3KPV4 340 aa11.42□□□□□ -0.58
SEC13-206ENST00000397102 TMEM212A6NML5 194 aa11.41□□□□□ -0.58
SEC13-206ENST00000397102 EGR2P11161 476 aaPredicted RBP11.41□□□□□ -0.58
SEC13-206ENST00000397102 SERPINA2P20848 420 aa11.41□□□□□ -0.58
SEC13-206ENST00000397102 ZP3P21754 424 aa11.41□□□□□ -0.58
SEC13-206ENST00000397102 POLR2IP36954 125 aaKnown RBP11.41□□□□□ -0.58
SEC13-206ENST00000397102 CX3CL1P78423 397 aa11.41□□□□□ -0.58
SEC13-206ENST00000397102 MORN2Q502X0 79 aa11.41□□□□□ -0.58
SEC13-206ENST00000397102 TRAT1Q6PIZ9 186 aa11.41□□□□□ -0.58
SEC13-206ENST00000397102 LINC00322Q6ZN03 302 aaPredicted RBP11.41□□□□□ -0.58
SEC13-206ENST00000397102 ODF3L1Q8IXM7 274 aa11.41□□□□□ -0.58
SEC13-206ENST00000397102 ACBD7Q8N6N7 88 aa11.41□□□□□ -0.58
SEC13-206ENST00000397102 OR1L1Q8NH94 360 aa11.41□□□□□ -0.58
SEC13-206ENST00000397102 MS4A10Q96PG2 267 aa11.41□□□□□ -0.58
SEC13-206ENST00000397102 CIB1Q99828 191 aa11.41□□□□□ -0.58
SEC13-206ENST00000397102 ABHD14AQ9BUJ0 271 aa11.41□□□□□ -0.58
SEC13-206ENST00000397102 RANGRFQ9HD47 186 aaPredicted RBP11.41□□□□□ -0.58
SEC13-206ENST00000397102 ING4Q9UNL4 249 aa11.41□□□□□ -0.58
SEC13-206ENST00000397102 SHISA3A0PJX4 238 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 CD40LGP29965 261 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 AKIRIN2Q53H80 203 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 ACTBL2Q562R1 376 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 RNLSQ5VYX0 342 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 LCN12Q6JVE5 192 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 UNQ5815/PRO19632Q6UWF5 114 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 PPP1R27Q86WC6 154 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 ZDHHC13Q8IUH4 622 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 OR9G4Q8NGQ1 327 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 OR4K15Q8NH41 348 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 OR5AK2Q8NH90 309 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 ABHD5Q8WTS1 349 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 DDB2Q92466 427 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 MRPL48Q96GC5 212 aaKnown RBP11.4□□□□□ -0.58
SEC13-206ENST00000397102 JAM3Q9BX67 310 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 GABARAPL3Q9BY60 117 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 FBXL15Q9H469 300 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 OR2S2Q9NQN1 319 aa11.4□□□□□ -0.58
SEC13-206ENST00000397102 PAK1IP1Q9NWT1 392 aaPredicted RBP11.4□□□□□ -0.58
SEC13-206ENST00000397102 CNOT2Q9NZN8 540 aaKnown RBP11.4□□□□□ -0.58
SEC13-206ENST00000397102 RRHO14718 337 aa11.39□□□□□ -0.59
SEC13-206ENST00000397102 LY6G6CO95867 125 aa11.39□□□□□ -0.59
SEC13-206ENST00000397102 ADARB1P78563 741 aaKnown RBP11.39□□□□□ -0.59
SEC13-206ENST00000397102 KLF5Q13887 457 aaPredicted RBP11.39□□□□□ -0.59
SEC13-206ENST00000397102 ATP6AP1Q15904 470 aa11.39□□□□□ -0.59
SEC13-206ENST00000397102 IL34Q6ZMJ4 242 aa11.39□□□□□ -0.59
SEC13-206ENST00000397102 ZNF833PQ6ZTB9 187 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms