RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 PDCD5O14737 125 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 DENRO43583 198 aaKnown RBP11.12□□□□□ -0.63
SEC13-204ENST00000397099 IGHV3-7P01780 117 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 SNRNP70P08621 437 aaKnown RBP11.12□□□□□ -0.63
SEC13-204ENST00000397099 RCC1P18754 421 aaPredicted RBP11.12□□□□□ -0.63
SEC13-204ENST00000397099 CD24P25063 80 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 RPS25P62851 125 aaKnown RBP11.12□□□□□ -0.63
SEC13-204ENST00000397099 QRFPP83859 136 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 EBI3Q14213 229 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 RAB11BQ15907 218 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 NKAPLQ5M9Q1 402 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 C1QL4Q86Z23 238 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 OR2T10Q8NGZ9 312 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 MRPL30Q8TCC3 161 aaKnown RBP11.12□□□□□ -0.63
SEC13-204ENST00000397099 RTN4IP1Q8WWV3 396 aaPredicted RBP11.12□□□□□ -0.63
SEC13-204ENST00000397099 FCGR1BQ92637 280 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 ST6GALNAC6Q969X2 333 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 GHITMQ9H3K2 345 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 OR2S2Q9NQN1 319 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 PLEKHJ1Q9NW61 149 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 V9GY05 133 aa11.12□□□□□ -0.63
SEC13-204ENST00000397099 YPEL1O60688 119 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 IGKV1D-33P01593 117 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 IGKV1-33P01594 117 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 MYL9P24844 172 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 BLVRBP30043 206 aaPredicted RBP11.11□□□□□ -0.63
SEC13-204ENST00000397099 UNC119Q13432 240 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 MORN2Q502X0 79 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 HIST2H2BDQ6DRA6 164 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 CD200R1LQ6Q8B3 271 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 MOB3BQ86TA1 216 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 TGIF2LXQ8IUE1 241 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 PRR18Q8N4B5 295 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 FAM89BQ8N5H3 189 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 OR5AU1Q8NGC0 362 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 OR4X2Q8NGF9 303 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 OR56B1Q8NGI3 324 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 YPEL2Q96QA6 119 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 NDUFB11Q9NX14 153 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 STEAP1Q9UHE8 339 aa11.11□□□□□ -0.63
SEC13-204ENST00000397099 TRBV6-6A0A0A6YYG2 114 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 LANCL1O43813 399 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 NAPSAO96009 420 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 AMY1AP04745 511 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 AMY2AP04746 511 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 MAP2K4P45985 399 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 FABP5Q01469 135 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 UTF1Q5T230 341 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 C5orf56Q8N8D9 126 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 ZNF439Q8NDP4 499 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 CHPT1Q8WUD6 406 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 FAM3DQ96BQ1 224 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 FAAP24Q9BTP7 215 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 CENPOQ9BU64 300 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 ABHD14AQ9BUJ0 271 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 GON7Q9BXV9 100 aa11.1□□□□□ -0.63
SEC13-204ENST00000397099 CHMP1AQ9HD42 196 aaPredicted RBP11.1□□□□□ -0.63
SEC13-204ENST00000397099 AK6Q9Y3D8 172 aaKnown RBP11.1□□□□□ -0.63
SEC13-204ENST00000397099 TSSC4Q9Y5U2 329 aaPredicted RBP11.1□□□□□ -0.63
SEC13-204ENST00000397099 IGHV3-43A0A0B4J1X8 118 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 TRDV1A0A1B0GX56 115 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 A0A1W2PPE3 182 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 ITGB1BP1O14713 200 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 MOSP00540 346 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 IGHV3-43DP0DP04 118 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 CD28P10747 220 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 SLC6A1P30531 599 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 SLC35B1P78383 322 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 CD83Q01151 205 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 HMGN3Q15651 99 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 CT45A1Q5HYN5 189 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 UBE2UQ5VVX9 321 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 OR10K2Q6IF99 312 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 FAM71F2Q6NXP2 309 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 ZNF880Q6PDB4 577 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 Q6ZS46 218 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 C6orf201Q7Z4U5 140 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 FOXRED2Q8IWF2 684 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 COMMD1Q8N668 190 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 OR1L1Q8NH94 360 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 CT45A3Q8NHU0 189 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 EAF1Q96JC9 268 aaPredicted RBP11.09□□□□□ -0.63
SEC13-204ENST00000397099 CITED2Q99967 270 aaPredicted RBP11.09□□□□□ -0.63
SEC13-204ENST00000397099 SULT4A1Q9BR01 284 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 LPAR5Q9H1C0 372 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 LIN7CQ9NUP9 197 aaKnown RBP11.09□□□□□ -0.63
SEC13-204ENST00000397099 RAB22AQ9UL26 194 aa11.09□□□□□ -0.63
SEC13-204ENST00000397099 MRPS15P82914 257 aaKnown RBP11.08□□□□□ -0.64
SEC13-204ENST00000397099 DIAPH2-AS1Q14236 149 aa11.08□□□□□ -0.64
SEC13-204ENST00000397099 ARL6IP1Q15041 203 aa11.08□□□□□ -0.64
SEC13-204ENST00000397099 P2RY14Q15391 338 aa11.08□□□□□ -0.64
SEC13-204ENST00000397099 NSUN5P1Q3KNT7 163 aa11.08□□□□□ -0.64
SEC13-204ENST00000397099 C2orf76Q3KRA6 126 aa11.08□□□□□ -0.64
SEC13-204ENST00000397099 C9orf152Q5JTZ5 239 aa11.08□□□□□ -0.64
SEC13-204ENST00000397099 LYG1Q8N1E2 194 aa11.08□□□□□ -0.64
SEC13-204ENST00000397099 Q8N6K4 173 aa11.08□□□□□ -0.64
SEC13-204ENST00000397099 OR2AK2Q8NG84 335 aa11.08□□□□□ -0.64
SEC13-204ENST00000397099 OR51D1Q8NGF3 324 aa11.08□□□□□ -0.64
SEC13-204ENST00000397099 OR10V1Q8NGI7 309 aa11.08□□□□□ -0.64
SEC13-204ENST00000397099 EDARADDQ8WWZ3 215 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms