RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 GP9P14770 177 aa13.57□□□□□ -0.24
EXOSC3-202ENST00000396521 ALDH3A2P51648 485 aa13.57□□□□□ -0.24
EXOSC3-202ENST00000396521 LIN54Q6MZP7 749 aa13.57□□□□□ -0.24
EXOSC3-202ENST00000396521 MINDY2Q8NBR6 621 aa13.57□□□□□ -0.24
EXOSC3-202ENST00000396521 TMEM106AQ96A25 262 aa13.57□□□□□ -0.24
EXOSC3-202ENST00000396521 ZNF251Q9BRH9 671 aa13.57□□□□□ -0.24
EXOSC3-202ENST00000396521 TAS2R4Q9NYW5 299 aa13.57□□□□□ -0.24
EXOSC3-202ENST00000396521 WSB1Q9Y6I7 421 aa13.57□□□□□ -0.24
EXOSC3-202ENST00000396521 IGHV3-43A0A0B4J1X8 118 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 LINC01619G3V211 115 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 LDLRAD4O15165 306 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 IGHV3-43DP0DP04 118 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 SLC2A2P11168 524 aaPredicted RBP13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 SPNP16150 400 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 SERPINA2P20848 420 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 BDKRB2P30411 391 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 SOX2P48431 317 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 ZNF134P52741 427 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 ACTBP60709 375 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 GNB1P62873 340 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 SYT6Q5T7P8 510 aaPredicted RBP13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 DDI2Q5TDH0 399 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 PYHIN1Q6K0P9 492 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 ACSM6Q6P461 480 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 RPL22L1Q6P5R6 122 aaKnown RBP13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 OVCH2Q7RTZ1 564 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 GAPTQ8N292 157 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 ISOC1Q96CN7 298 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 TM2D3Q9BRN9 247 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 PARP11Q9NR21 331 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 RCC2Q9P258 522 aaKnown RBP13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 KIAA1456Q9P272 454 aa13.56□□□□□ -0.24
EXOSC3-202ENST00000396521 E9PI62 339 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 G3V318 75 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 ATP6V0E1O15342 81 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 SLC31A2O15432 143 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 NBR2O15453 112 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 HBZP02008 142 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 MYF6P23409 242 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 TMEM267Q0VDI3 215 aaPredicted RBP13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 C5orf64Q2M2E5 130 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 SLC22A6Q4U2R8 563 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 ZNF660Q6AZW8 331 aaPredicted RBP13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 LYPD6Q86Y78 171 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 NPBQ8NG41 125 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 DLX4Q92988 240 aaPredicted RBP13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 FLYWCH2Q96CP2 140 aaKnown RBP13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 OR4C12Q96R67 309 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 TOLLIPQ9H0E2 274 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 VCXQ9H320 206 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 OR2S2Q9NQN1 319 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 MRPS18AQ9NVS2 196 aaKnown RBP13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 ETAA1Q9NY74 926 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 KCNIP1Q9NZI2 227 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 RNF150Q9ULK6 438 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 LRRC42Q9Y546 428 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 DYNC2H1Q8NCM8 4307 aaKnown RBP13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 DNAH7Q8WXX0 4024 aa13.55□□□□□ -0.24
EXOSC3-202ENST00000396521 IGHV7-81A0A0B4J1V7 117 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 FAM90A7PA6NKC0 464 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 FAM90A23PA8MXZ1 464 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 A8MZ25 164 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 RGS11O94810 467 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 CD40LGP29965 261 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 CRIP2P52943 208 aaPredicted RBP13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 LRRC36Q1X8D7 754 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 MORN2Q502X0 79 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 LY6G6FQ5SQ64 297 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 UBALD1Q8TB05 177 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 OR5B12Q96R08 314 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 ELOVL1Q9BW60 279 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 ANKRD60Q9BZ19 345 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 C8orf4Q9NR00 106 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 ZNF581Q9P0T4 197 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 CKLFQ9UBR5 152 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 JPT1Q9UK76 154 aa13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 FOXA2Q9Y261 457 aaPredicted RBP13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 RPL36Q9Y3U8 105 aaKnown RBP13.54□□□□□ -0.24
EXOSC3-202ENST00000396521 HUWE1Q7Z6Z7 4374 aaKnown RBP13.53□□□□□ -0.24
EXOSC3-202ENST00000396521 GPX5O75715 221 aa13.53□□□□□ -0.24
EXOSC3-202ENST00000396521 LGALS1P09382 135 aaKnown RBP13.53□□□□□ -0.24
EXOSC3-202ENST00000396521 VEGFCP49767 419 aa13.53□□□□□ -0.24
EXOSC3-202ENST00000396521 HTD2P86397 168 aa13.53□□□□□ -0.24
EXOSC3-202ENST00000396521 PITPNAQ00169 270 aa13.53□□□□□ -0.24
EXOSC3-202ENST00000396521 RIPK1Q13546 671 aa13.53□□□□□ -0.24
EXOSC3-202ENST00000396521 CDH26Q8IXH8 852 aa13.53□□□□□ -0.24
EXOSC3-202ENST00000396521 OR10V1Q8NGI7 309 aa13.53□□□□□ -0.24
EXOSC3-202ENST00000396521 RHOXF1Q8NHV9 184 aa13.53□□□□□ -0.24
EXOSC3-202ENST00000396521 ABHD14AQ9BUJ0 271 aa13.53□□□□□ -0.24
EXOSC3-202ENST00000396521 NKX1-2Q9UD57 310 aaPredicted RBP13.53□□□□□ -0.24
EXOSC3-202ENST00000396521 MAGEA13PA6NCF6 341 aa13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 SC5DO75845 299 aa13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 NDUFA3O95167 84 aa13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 HSPB1P04792 205 aaKnown RBP13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 GABRB1P18505 474 aa13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 BLVRBP30043 206 aaPredicted RBP13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 ZIK1Q3SY52 487 aaPredicted RBP13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 RAB12Q6IQ22 244 aa13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 TMPRSS11AQ6ZMR5 421 aa13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 PRR18Q8N4B5 295 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms