RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 TOR1AO14656 332 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 ECI1P42126 302 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 STPG2Q8N412 459 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 MARC2Q969Z3 335 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 PIK3IP1Q96FE7 263 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 RNF126Q9BV68 326 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 USP9YO00507 2555 aaPredicted RBP13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 C16orf97H3BN30 126 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 CST4P01036 141 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 CTXN2P0C2S0 81 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 PRDX2P32119 198 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 RPL23AP62750 156 aaKnown RBP13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 ZNF474Q6S9Z5 364 aaPredicted RBP13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 TMEM108Q6UXF1 575 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 LHFPL5Q8TAF8 219 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 RND1Q92730 232 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 LRRC46Q96FV0 321 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 OR51I2Q9H344 312 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 HIVEP3Q5T1R4 2406 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 ENSAO43768 121 aaKnown RBP13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 SS18L1O75177 396 aaPredicted RBP13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 IFNA10P01566 189 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 HBZP02008 142 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 SNRNP70P08621 437 aaKnown RBP13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 LY6DQ14210 128 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 FAM185AQ8N0U4 392 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 MOB3AQ96BX8 217 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 PUS1Q9Y606 427 aaKnown RBP eCLIP13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 PKD1L2Q7Z442 2459 aa13.46□□□□□ -0.25
SMARCD1-202ENST00000394963 PCP4L1A6NKN8 68 aa13.46□□□□□ -0.26
SMARCD1-202ENST00000394963 RBMXL3Q8N7X1 1067 aaKnown RBP13.46□□□□□ -0.26
SMARCD1-202ENST00000394963 BPIFCQ8NFQ6 507 aa13.46□□□□□ -0.26
SMARCD1-202ENST00000394963 FBLN5Q9UBX5 448 aa13.46□□□□□ -0.26
SMARCD1-202ENST00000394963 EXPH5Q8NEV8 1989 aa13.46□□□□□ -0.26
SMARCD1-202ENST00000394963 ZNF14P17017 642 aaPredicted RBP13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 TMEM42Q69YG0 159 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 NMES1Q9C002 83 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 SH3BGRL3Q9H299 93 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 DCAF16Q9NXF7 216 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 PLXNB1O43157 2135 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 MLNRO43193 412 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 APELAP0DMC3 54 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 COX5BP10606 129 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 P2RY6Q15077 328 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 EIF2S3LQ2VIR3 472 aaKnown RBP13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 H2BFWTQ7Z2G1 175 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 WDR86Q86TI4 376 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 OR2C3Q8N628 320 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 ZFP92A6NM28 416 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 CCL21O00585 134 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 IFNA4P05014 189 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 GLRX5Q86SX6 157 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 POLQO75417 2590 aa13.45□□□□□ -0.26
SMARCD1-202ENST00000394963 PGLYRP1O75594 196 aaPredicted RBP13.44□□□□□ -0.26
SMARCD1-202ENST00000394963 NHLRC3Q5JS37 347 aa13.44□□□□□ -0.26
SMARCD1-202ENST00000394963 PRAMEF5Q5TYX0 476 aa13.44□□□□□ -0.26
SMARCD1-202ENST00000394963 HEYLQ9NQ87 328 aaPredicted RBP13.44□□□□□ -0.26
SMARCD1-202ENST00000394963 RCC2Q9P258 522 aaKnown RBP13.44□□□□□ -0.26
SMARCD1-202ENST00000394963 LYNX1G3V0Z9 82 aa13.44□□□□□ -0.26
SMARCD1-202ENST00000394963 LYNX1P0DP58 116 aa13.44□□□□□ -0.26
SMARCD1-202ENST00000394963 HOXD11P31277 338 aaPredicted RBP13.44□□□□□ -0.26
SMARCD1-202ENST00000394963 CATR1Q13166 79 aa13.44□□□□□ -0.26
SMARCD1-202ENST00000394963 CRIP3Q6Q6R5 217 aa13.44□□□□□ -0.26
SMARCD1-202ENST00000394963 MRPL30Q8TCC3 161 aaKnown RBP13.44□□□□□ -0.26
SMARCD1-202ENST00000394963 TMEM187Q14656 261 aa13.44□□□□□ -0.26
SMARCD1-202ENST00000394963 TESK1Q15569 626 aa13.44□□□□□ -0.26
SMARCD1-202ENST00000394963 RIMS4Q9H426 269 aaPredicted RBP13.44□□□□□ -0.26
SMARCD1-202ENST00000394963 MECP2P51608 486 aaKnown RBP13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 HERPUD1Q15011 391 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 COLCA1Q6ZS62 124 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 WDR31Q8NA23 367 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 OR13A1Q8NGR1 328 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 RPS10P5Q9NQ39 176 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 FAM212BQ9NTI7 297 aaPredicted RBP13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 PSENENQ9NZ42 101 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 RPS10-NUDT3A0A1W2PQS6 291 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 CLDN14O95500 239 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 IGLV3-1P01715 115 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 F2RP25116 425 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 SURF2Q15527 256 aaPredicted RBP13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 ZNF674Q2M3X9 581 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 MIDNQ504T8 468 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 LHFPL1Q86WI0 220 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 Q8IYB0 196 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 CA5BP1Q8WTZ4 195 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 TMED3Q9Y3Q3 217 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 C12orf77C9JDV5 145 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 IL24Q13007 206 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 SPSB4Q96A44 273 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 WIPI2Q9Y4P8 454 aa13.43□□□□□ -0.26
SMARCD1-202ENST00000394963 JTBO76095 146 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 OR4A8P0C604 315 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 DYNLT3P51808 116 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 TGIF2LYQ8IUE0 185 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 FAM216BQ8N7L0 139 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 C17orf50Q8WW18 174 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 AKR1E2Q96JD6 320 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 DMRTA2Q96SC8 542 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 CLN8Q9UBY8 286 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 FGF8P55075 233 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms