RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 EPHA8P29322 1005 aaPredicted RBP14.11□□□□□ -0.15
SHANK1-204ENST00000391814 P2RY4P51582 365 aa14.11□□□□□ -0.15
SHANK1-204ENST00000391814 ADIPOQQ15848 244 aa14.11□□□□□ -0.15
SHANK1-204ENST00000391814 ZNF124Q15973 351 aa14.11□□□□□ -0.15
SHANK1-204ENST00000391814 ZCCHC14Q8WYQ9 949 aaKnown RBP14.11□□□□□ -0.15
SHANK1-204ENST00000391814 LSM10Q969L4 123 aaKnown RBP14.11□□□□□ -0.15
SHANK1-204ENST00000391814 SNRNP40Q96DI7 357 aaKnown RBP14.11□□□□□ -0.15
SHANK1-204ENST00000391814 SDHCQ99643 169 aaPredicted RBP14.11□□□□□ -0.15
SHANK1-204ENST00000391814 TREM2Q9NZC2 230 aa14.11□□□□□ -0.15
SHANK1-204ENST00000391814 OR2Y1Q8NGV0 311 aa14.11□□□□□ -0.15
SHANK1-204ENST00000391814 EFNB1P98172 346 aa14.11□□□□□ -0.15
SHANK1-204ENST00000391814 APCDD1LQ8NCL9 501 aa14.11□□□□□ -0.15
SHANK1-204ENST00000391814 C14orf144Q96I85 54 aa14.11□□□□□ -0.15
SHANK1-204ENST00000391814 MYOZ1Q9NP98 299 aaPredicted RBP14.11□□□□□ -0.15
SHANK1-204ENST00000391814 PEF1Q9UBV8 284 aaKnown RBP14.11□□□□□ -0.15
SHANK1-204ENST00000391814 RBKSQ9H477 322 aa14.11□□□□□ -0.15
SHANK1-204ENST00000391814 SOX21Q9Y651 276 aaPredicted RBP14.11□□□□□ -0.15
SHANK1-204ENST00000391814 A0A1W2PPC1 479 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 OR10D3Q8NH80 312 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 ST6GALNAC6Q969X2 333 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 MIA3Q5JRA6 1907 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 MT-ND6P03923 174 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 DANCRP0C864 163 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 HOXB1P14653 301 aaPredicted RBP14.1□□□□□ -0.15
SHANK1-204ENST00000391814 MEF2BQ02080 365 aaPredicted RBP14.1□□□□□ -0.15
SHANK1-204ENST00000391814 LAMTOR1Q6IAA8 161 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 IP6K3Q96PC2 410 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 OR2J1Q9GZK6 312 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 DLEC1Q9Y238 1755 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 RNFT1Q5M7Z0 435 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 P2RX4Q99571 388 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 NUDT3O95989 172 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 KIR2DL1P43626 348 aaPredicted RBP14.1□□□□□ -0.15
SHANK1-204ENST00000391814 KIR2DL2P43627 348 aaPredicted RBP14.1□□□□□ -0.15
SHANK1-204ENST00000391814 SERF2P84101 59 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 ZNF83P51522 516 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 OR6X1Q8NH79 312 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 MRGPRX1Q96LB2 322 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 PCOLCE2Q9UKZ9 415 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 OR51B2Q9Y5P1 312 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 TMEM252Q8N6L7 170 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 LRRC61Q9BV99 259 aa14.1□□□□□ -0.15
SHANK1-204ENST00000391814 ZFP36L2P47974 494 aaKnown RBP14.09□□□□□ -0.15
SHANK1-204ENST00000391814 CCL7P80098 99 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 SLC25A38Q96DW6 304 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 TUBD1Q9UJT1 453 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 ZNF418Q8TF45 676 aaPredicted RBP14.09□□□□□ -0.15
SHANK1-204ENST00000391814 CARHSP1Q9Y2V2 147 aaKnown RBP14.09□□□□□ -0.15
SHANK1-204ENST00000391814 DOCK2Q92608 1830 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 MRPS11P82912 194 aaKnown RBP14.09□□□□□ -0.15
SHANK1-204ENST00000391814 PGLYRP3Q96LB9 341 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 NUDT16L1Q9BRJ7 211 aaKnown RBP14.09□□□□□ -0.15
SHANK1-204ENST00000391814 ZNFX1Q9P2E3 1918 aaKnown RBP14.09□□□□□ -0.15
SHANK1-204ENST00000391814 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.09□□□□□ -0.15
SHANK1-204ENST00000391814 C7orf71A4D174 169 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 BGLAPP02818 100 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 HERPUD1Q15011 391 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 BHLHA9Q7RTU4 235 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 WFDC3Q8IUB2 231 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 SFTPA2Q8IWL1 248 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 SFTPA1Q8IWL2 248 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 TM4SF19Q96DZ7 209 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 A8MXK9 166 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 ZAR1Q86SH2 424 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 NIT1Q86X76 327 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 FAM181AQ8N9Y4 354 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 SFRP2Q96HF1 295 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 SPSB2Q99619 263 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 PMCHL2Q9BQD1 86 aa14.09□□□□□ -0.15
SHANK1-204ENST00000391814 VAX1Q5SQQ9 334 aa14.08□□□□□ -0.15
SHANK1-204ENST00000391814 RASL11BQ9BPW5 248 aa14.08□□□□□ -0.15
SHANK1-204ENST00000391814 NPIPB8E9PQR5 432 aa14.08□□□□□ -0.16
SHANK1-204ENST00000391814 NPIPB7O75200 414 aa14.08□□□□□ -0.16
SHANK1-204ENST00000391814 KLRB1Q12918 225 aa14.08□□□□□ -0.16
SHANK1-204ENST00000391814 RBPMS2Q6ZRY4 209 aaKnown RBP14.08□□□□□ -0.16
SHANK1-204ENST00000391814 SLC25A33Q9BSK2 321 aa14.08□□□□□ -0.16
SHANK1-204ENST00000391814 CXorf66Q5JRM2 361 aaPredicted RBP14.08□□□□□ -0.16
SHANK1-204ENST00000391814 C10orf35Q96D05 121 aa14.08□□□□□ -0.16
SHANK1-204ENST00000391814 CDX2Q99626 313 aaPredicted RBP14.08□□□□□ -0.16
SHANK1-204ENST00000391814 A6NNC1 897 aa14.08□□□□□ -0.16
SHANK1-204ENST00000391814 HRKO00198 91 aa14.08□□□□□ -0.16
SHANK1-204ENST00000391814 HLA-DQA1P01909 254 aa14.08□□□□□ -0.16
SHANK1-204ENST00000391814 SELENOHQ8IZQ5 122 aaKnown RBP14.08□□□□□ -0.16
SHANK1-204ENST00000391814 AQP3Q92482 292 aa14.08□□□□□ -0.16
SHANK1-204ENST00000391814 NEU1Q99519 415 aa14.08□□□□□ -0.16
SHANK1-204ENST00000391814 MMP17Q9ULZ9 603 aa14.08□□□□□ -0.16
SHANK1-204ENST00000391814 TMEM189A5PLL7 270 aa14.08□□□□□ -0.16
SHANK1-204ENST00000391814 ZNF729A6NN14 1252 aaPredicted RBP14.08□□□□□ -0.16
SHANK1-204ENST00000391814 LMX1BO60663 402 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 HLA-DRB1P01911 266 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 COA4Q9NYJ1 87 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 CENPVL1A0A0U1RR11 272 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 ARL14EPLP0DKL9 152 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 COL10A1Q03692 680 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 P2RY6Q15077 328 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 PTX4Q96A99 478 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 GPR132Q9UNW8 380 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 ZNF646O15015 1829 aaPredicted RBP14.07□□□□□ -0.16
SHANK1-204ENST00000391814 TNFRSF9Q07011 255 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 NPDC1Q9NQX5 325 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms