RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 MAP1LC3B2A6NCE7 125 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 CTSDP07339 412 aaPredicted RBP16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 DOK3Q7L591 496 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 TMEM251Q8N6I4 163 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 MAP1LC3BQ9GZQ8 125 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 DNAJC4Q9NNZ3 241 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 DUSP13Q9UII6 198 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 ZNF891A8MT65 544 aaPredicted RBP16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 ADAM20O43506 726 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 SP1P08047 785 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 PMCHP20382 165 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 PTGER4P35408 488 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 C10orf91Q5T1B1 145 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 ATP5SQ99766 215 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 TTTY12Q9BZ98 90 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 ZNF552Q9H707 407 aaPredicted RBP16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 ZNF665Q9H7R5 613 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 XIRP2A4UGR9 3374 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 CADP27708 2225 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 ANKRD30BLA7E2S9 258 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 MELTFP08582 738 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 ERVFRD-1P60508 538 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 ERVFC1-1P60608 527 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 HIKESHIQ53FT3 197 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 VAX1Q5SQQ9 334 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 SPATA46Q5T0L3 261 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 LINC00114Q6XXX2 140 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 ZNF664Q8N3J9 261 aa16.35■□□□□ 0.21
PPFIA1-202ENST00000389547 KISS1Q15726 138 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 FNDC7Q5VTL7 733 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 ABLIM2Q6H8Q1 611 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 UNQ6494/PRO21346Q6UXR6 183 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 GPX7Q96SL4 187 aaPredicted RBP16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 STARD10Q9Y365 291 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 ZNF737O75373 536 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 SELENOVP59797 346 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 ZNF611Q8N823 705 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 HDHD3Q9BSH5 251 aaPredicted RBP16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 HSPB1P04792 205 aaKnown RBP16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 CELA3AP09093 270 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 RELQ04864 619 aaPredicted RBP16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 AADACL3Q5VUY0 350 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 OR5R1Q8NH85 324 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 GCM1Q9NP62 436 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 UBE2G2P60604 165 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 C1QL4Q86Z23 238 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 ZNF441Q8N8Z8 693 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 NAT8Q9UHE5 227 aa16.34■□□□□ 0.21
PPFIA1-202ENST00000389547 COL10A1Q03692 680 aa16.33■□□□□ 0.21
PPFIA1-202ENST00000389547 PRDM13Q9H4Q3 707 aa16.33■□□□□ 0.21
PPFIA1-202ENST00000389547 OBP2BQ9NPH6 170 aa16.33■□□□□ 0.21
PPFIA1-202ENST00000389547 DLEU1O43261 78 aa16.33■□□□□ 0.2
PPFIA1-202ENST00000389547 CNN3Q15417 329 aaKnown RBP16.33■□□□□ 0.2
PPFIA1-202ENST00000389547 ABHD14AQ9BUJ0 271 aa16.33■□□□□ 0.2
PPFIA1-202ENST00000389547 LPAR5Q9H1C0 372 aa16.33■□□□□ 0.2
PPFIA1-202ENST00000389547 CNN1P51911 297 aaKnown RBP16.33■□□□□ 0.2
PPFIA1-202ENST00000389547 PTX4Q96A99 478 aa16.33■□□□□ 0.2
PPFIA1-202ENST00000389547 CYC1P08574 325 aa16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 CCL20P78556 96 aa16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 ZNF684Q5T5D7 378 aa16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 LIAT1Q6ZQX7 453 aa16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 POC1BQ8TC44 478 aa16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 C22orf15Q8WYQ4 148 aa16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 CTDSP1Q9GZU7 261 aa16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 IGF2RP11717 2491 aa16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 NKX2-6A6NCS4 301 aa16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 MARCH11A6NNE9 402 aa16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 HSBP1L1C9JCN9 74 aa16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 SPRY1O43609 319 aaPredicted RBP16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 SRP19P09132 144 aaKnown RBP16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 GCH1P30793 250 aa16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 TFPI2P48307 235 aa16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 CACNA1AO00555 2505 aa16.32■□□□□ 0.2
PPFIA1-202ENST00000389547 IGKV1D-43A0A0B4J1Z2 117 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 WISP1O95388 367 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 MED13Q9UHV7 2174 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 H3BMH7 237 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 LYZL6O75951 148 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 MGST1P10620 155 aaKnown RBP16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 PECRQ9BY49 303 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 ANXA10Q9UJ72 324 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 RNF150Q9ULK6 438 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 ZNF106Q9H2Y7 1883 aaKnown RBP16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 C1orf100Q5SVJ3 147 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 LEMD1Q68G75 181 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 BTNL3Q6UXE8 466 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 OR4X1Q8NH49 305 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 OR1F12Q8NHA8 337 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 TMEM208Q9BTX3 173 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 SLC25A22Q9H936 323 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 SLC2A9Q9NRM0 540 aa16.31■□□□□ 0.2
PPFIA1-202ENST00000389547 IGLV1-36A0A0B4J1U3 117 aa16.3■□□□□ 0.2
PPFIA1-202ENST00000389547 SPINK4O60575 86 aa16.3■□□□□ 0.2
PPFIA1-202ENST00000389547 AMBPP02760 352 aa16.3■□□□□ 0.2
PPFIA1-202ENST00000389547 PMELP40967 661 aa16.3■□□□□ 0.2
PPFIA1-202ENST00000389547 RSPO4Q2I0M5 234 aaPredicted RBP16.3■□□□□ 0.2
PPFIA1-202ENST00000389547 LYRM2Q9NU23 88 aaPredicted RBP16.3■□□□□ 0.2
PPFIA1-202ENST00000389547 PRRC2CQ9Y520 2896 aaKnown RBP16.3■□□□□ 0.2
PPFIA1-202ENST00000389547 LOC102723996A0A087X1L8 192 aa16.3■□□□□ 0.2
PPFIA1-202ENST00000389547 TRAF3IP2O43734 574 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms