RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 DBX1A6NMT0 343 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 MS4A18H0YCH9 400 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 EFEMP2O95967 443 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 TNXAQ16473 311 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 MS4A18Q3C1V0 323 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 TMEM30BQ3MIR4 351 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 GCSAMQ8N6F7 178 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 C2CD4CQ8TF44 421 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 LINC00470Q9BZP3 86 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 MMP26Q9NRE1 261 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 SLC25A10Q9UBX3 287 aaPredicted RBP11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 POLR2GP62487 172 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 FAM3AP98173 230 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 KLRB1Q12918 225 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 SAXO1Q8IYX7 474 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 GAPTQ8N292 157 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 OR11H7Q8NGC8 314 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 ABHD17AQ96GS6 310 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 TMEM167BQ9NRX6 74 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 FBXL17Q9UF56 701 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 OPN4Q9UHM6 478 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 MAP1LC3B2A6NCE7 125 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 TBX6O95947 436 aaPredicted RBP11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 GUK1Q16774 197 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 CLEC2AQ6UVW9 174 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 PCGF1Q9BSM1 259 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 MAP1LC3BQ9GZQ8 125 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 RALGAPA2Q2PPJ7 1873 aa11.25□□□□□ -0.61
PTPRN2-203ENST00000389418 SYNGR1O43759 233 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 S100A4P26447 101 aaKnown RBP11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 CDC34P49427 236 aaPredicted RBP11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 MIDNQ504T8 468 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 FNDC7Q5VTL7 733 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 NECAP1Q8NC96 275 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 CHODLQ9H9P2 273 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 MRPL22Q9NWU5 206 aaKnown RBP11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 ELOVL5Q9NYP7 299 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 SF3B6Q9Y3B4 125 aaKnown RBP11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 HLA-DQB1P01920 261 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 AESQ08117 197 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 VAX1Q5SQQ9 334 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 C1orf100Q5SVJ3 147 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 C10orf128Q5T292 105 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 CD200R1LQ6Q8B3 271 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 SEZ6L2Q6UXD5 910 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 FAM122AQ96E09 287 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 WSB1Q9Y6I7 421 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 G3V3Q6 166 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 RNASEK-C17orf49H0YIS7 233 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 RAB29O14966 203 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 SMIM17P0DL12 118 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 OR1L8Q8NGR8 309 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 DTD1Q8TEA8 209 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 SCMH1Q96GD3 660 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 GHITMQ9H3K2 345 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 LIPGQ9Y5X9 500 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 COL4A6Q14031 1691 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 COX6B1P14854 86 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 HLA-GP17693 338 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 MC5RP33032 325 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 FDX2Q6P4F2 183 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 OR8G5Q8NG78 346 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 SRXN1Q9BYN0 137 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 CCL28Q9NRJ3 127 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 PATJQ8NI35 1801 aa11.24□□□□□ -0.61
PTPRN2-203ENST00000389418 THY1P04216 161 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 DAOP14920 347 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 PAX5Q02548 391 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 STXBP6Q8NFX7 210 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 TMEM45BQ96B21 275 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 ZMIZ1Q9ULJ6 1067 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 RAXQ9Y2V3 346 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 ANK1P16157 1881 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 FREM3P0C091 2139 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 TMEM33P57088 247 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 OR4D10Q8NGI6 311 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 OR1L6Q8NGR2 347 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 HARBI1Q96MB7 349 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 V9GYS6 101 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 IGLV3-12A0A075B6K2 115 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 SNRPCP09234 159 aaKnown RBP11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 LINC01560Q8TB33 94 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 SNX22Q96L94 193 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 PRF1P14222 555 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 EGR4Q05215 589 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 NRN1LQ496H8 165 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 SIGIRRQ6IA17 410 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 GPHA2Q96T91 129 aa11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 TECRQ9NZ01 308 aaKnown RBP11.23□□□□□ -0.61
PTPRN2-203ENST00000389418 THSD7BQ9C0I4 1608 aa11.22□□□□□ -0.61
PTPRN2-203ENST00000389418 LOC390937A0A1W2PQ73 354 aa11.22□□□□□ -0.61
PTPRN2-203ENST00000389418 K7N7A8 449 aa11.22□□□□□ -0.61
PTPRN2-203ENST00000389418 PIN1P1O15428 100 aa11.22□□□□□ -0.61
PTPRN2-203ENST00000389418 SEMA7AO75326 666 aa11.22□□□□□ -0.61
PTPRN2-203ENST00000389418 PAX6P26367 422 aa11.22□□□□□ -0.61
PTPRN2-203ENST00000389418 CEBPDP49716 269 aaPredicted RBP11.22□□□□□ -0.61
PTPRN2-203ENST00000389418 DEFA6Q01524 100 aa11.22□□□□□ -0.61
PTPRN2-203ENST00000389418 LY6DQ14210 128 aa11.22□□□□□ -0.61
PTPRN2-203ENST00000389418 LINC01590Q5TEZ4 76 aa11.22□□□□□ -0.61
PTPRN2-203ENST00000389418 OR10G4Q8NGN3 311 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms