RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 ZNF616Q08AN1 781 aa12.48□□□□□ -0.41
VCX3A-201ENST00000381089 FAM71E2Q8N5Q1 922 aa12.48□□□□□ -0.41
VCX3A-201ENST00000381089 TMEM104Q8NE00 496 aa12.48□□□□□ -0.41
VCX3A-201ENST00000381089 OR1N2Q8NGR9 330 aa12.48□□□□□ -0.41
VCX3A-201ENST00000381089 HSPB9Q9BQS6 159 aa12.48□□□□□ -0.41
VCX3A-201ENST00000381089 VSIG4Q9Y279 399 aa12.48□□□□□ -0.41
VCX3A-201ENST00000381089 ERGIC3Q9Y282 383 aa12.48□□□□□ -0.41
VCX3A-201ENST00000381089 GTF2A1P52655 376 aaPredicted RBP12.47□□□□□ -0.41
VCX3A-201ENST00000381089 RBM11P57052 281 aaKnown RBP12.47□□□□□ -0.41
VCX3A-201ENST00000381089 GABARAPL2P60520 117 aa12.47□□□□□ -0.41
VCX3A-201ENST00000381089 TMEM30BQ3MIR4 351 aa12.47□□□□□ -0.41
VCX3A-201ENST00000381089 NHLRC3Q5JS37 347 aa12.47□□□□□ -0.41
VCX3A-201ENST00000381089 ATAD3CQ5T2N8 411 aa12.47□□□□□ -0.41
VCX3A-201ENST00000381089 XAF1Q6GPH4 301 aa12.47□□□□□ -0.41
VCX3A-201ENST00000381089 ZFP41Q8N8Y5 198 aa12.47□□□□□ -0.41
VCX3A-201ENST00000381089 OR52N1Q8NH53 320 aa12.47□□□□□ -0.41
VCX3A-201ENST00000381089 ST6GALNAC6Q969X2 333 aa12.47□□□□□ -0.41
VCX3A-201ENST00000381089 PDCD1LG2Q9BQ51 273 aa12.47□□□□□ -0.41
VCX3A-201ENST00000381089 GNG12Q9UBI6 72 aa12.47□□□□□ -0.41
VCX3A-201ENST00000381089 ING4Q9UNL4 249 aa12.47□□□□□ -0.41
VCX3A-201ENST00000381089 RYR2Q92736 4967 aa12.47□□□□□ -0.41
VCX3A-201ENST00000381089 DNAH7Q8WXX0 4024 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 IGHV3-43A0A0B4J1X8 118 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 C15orf65H3BRN8 121 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 AIPO00170 330 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 SPINT2O43291 252 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 ZNF780AO75290 641 aaPredicted RBP12.46□□□□□ -0.41
VCX3A-201ENST00000381089 LALBAP00709 142 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 IGHV3-43DP0DP04 118 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 F2RL1P55085 397 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 PPP3R1P63098 170 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 RUNX1Q01196 453 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 IRF3Q14653 427 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 MPV17LQ2QL34 196 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 ASCL4Q6XD76 172 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 SLC25A48Q6ZT89 311 aaKnown RBP12.46□□□□□ -0.41
VCX3A-201ENST00000381089 PRSS48Q7RTY5 328 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 SBSPONQ8IVN8 264 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 MYOZ3Q8TDC0 251 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 CCDC107Q8WV48 283 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 MND1Q9BWT6 205 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 YTHDF1Q9BYJ9 559 aaKnown RBP12.46□□□□□ -0.41
VCX3A-201ENST00000381089 GHITMQ9H3K2 345 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 ISYNA1Q9NPH2 558 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 IL36GQ9NZH8 169 aa12.46□□□□□ -0.41
VCX3A-201ENST00000381089 PNMA8CA0A1B0GUJ8 204 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 OVOL1O14753 267 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 GEMIN2O14893 280 aaKnown RBP12.45□□□□□ -0.42
VCX3A-201ENST00000381089 SAP30O75446 220 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 CDRT1O95170 752 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 SOX2P48431 317 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 ZNF137PP52743 207 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 WNT4P56705 351 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 MED22Q15528 200 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 MMDQ15546 238 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 KCTD21Q4G0X4 260 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 C6orf183Q5T699 404 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 ZNF529Q6P280 563 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 NANOGP1Q8N7R0 232 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 OR51A2Q8NGJ7 313 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 UBALD1Q8TB05 177 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 SPACA1Q9HBV2 294 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 BABAM2Q9NXR7 383 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 TAS2R4Q9NYW5 299 aa12.45□□□□□ -0.42
VCX3A-201ENST00000381089 SACSQ9NZJ4 4579 aa12.44□□□□□ -0.42
VCX3A-201ENST00000381089 ZNF736B4DX44 427 aaPredicted RBP12.44□□□□□ -0.42
VCX3A-201ENST00000381089 I3L521 148 aa12.44□□□□□ -0.42
VCX3A-201ENST00000381089 SLC2A2P11168 524 aaPredicted RBP12.44□□□□□ -0.42
VCX3A-201ENST00000381089 SERPINA2P20848 420 aa12.44□□□□□ -0.42
VCX3A-201ENST00000381089 ZNF93P35789 620 aaPredicted RBP12.44□□□□□ -0.42
VCX3A-201ENST00000381089 DDI2Q5TDH0 399 aa12.44□□□□□ -0.42
VCX3A-201ENST00000381089 RNLSQ5VYX0 342 aa12.44□□□□□ -0.42
VCX3A-201ENST00000381089 ZNF497Q6ZNH5 498 aa12.44□□□□□ -0.42
VCX3A-201ENST00000381089 ZNF491Q8N8L2 437 aa12.44□□□□□ -0.42
VCX3A-201ENST00000381089 ZNF485Q8NCK3 441 aa12.44□□□□□ -0.42
VCX3A-201ENST00000381089 OR6Q1Q8NGQ2 317 aa12.44□□□□□ -0.42
VCX3A-201ENST00000381089 GPR148Q8TDV2 347 aa12.44□□□□□ -0.42
VCX3A-201ENST00000381089 OR51J1Q9H342 316 aa12.44□□□□□ -0.42
VCX3A-201ENST00000381089 GNB4Q9HAV0 340 aa12.44□□□□□ -0.42
VCX3A-201ENST00000381089 TMEM138Q9NPI0 162 aa12.44□□□□□ -0.42
VCX3A-201ENST00000381089 TRAPPC2LQ9UL33 140 aa12.44□□□□□ -0.42
VCX3A-201ENST00000381089 LSM2Q9Y333 95 aaKnown RBP12.44□□□□□ -0.42
VCX3A-201ENST00000381089 TENM2Q9NT68 2774 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 TNFAIP8O95379 198 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 MT-ND4P03905 459 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 FRMD6-AS1P0C7T7 363 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 HSMCR30P0CW71 290 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 GTF2F2P13984 249 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 LSAMPQ13449 338 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 GPR176Q14439 515 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 SPHARQ15513 63 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 STEAP3Q658P3 488 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 TRAT1Q6PIZ9 186 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 ZNF773Q6PK81 442 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 OVCH2Q7RTZ1 564 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 SPARTQ8N0X7 666 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 OR5B12Q96R08 314 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 ZNF251Q9BRH9 671 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 KLK15Q9H2R5 256 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 PARP11Q9NR21 331 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms