RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 TGIF1Q15583 401 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 MYEOVQ96EZ4 313 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 SLX1AQ9BQ83 275 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 KBTBD11-OT1A0A1B0GTJ5 212 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 ZFPL1O95159 310 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 SEC11AP67812 179 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 ZNF562Q6V9R5 426 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 NEURL3Q96EH8 262 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 RAB1BQ9H0U4 201 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 SS18L2Q9UHA2 77 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 H0YL77 283 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 GAGE13Q4V321 117 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 ZNF793Q6ZN11 406 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 DOLPP1Q86YN1 238 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 SPEM1Q8N4L4 309 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 DPH3P1Q9H4G8 78 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 MS4A18H0YCH9 400 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 TNFSF13O75888 250 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 COX6B1P14854 86 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 RPS4XP62701 263 aaKnown RBP9.48□□□□□ -0.89
CLCN4-202ENST00000380833 MS4A18Q3C1V0 323 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 LRRC75AQ8NAA5 344 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 MGST2Q99735 147 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 ASB1Q9Y576 335 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 DLL1O00548 723 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 S1PR2O95136 353 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 LINC00869P0C866 280 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 RBPMS2Q6ZRY4 209 aaKnown RBP9.48□□□□□ -0.89
CLCN4-202ENST00000380833 ASB10Q8WXI3 467 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 POM121L2Q96KW2 1035 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 GAGE12BA1L429 117 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 GRIFINA4D1Z8 144 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 METTL12A8MUP2 240 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 CTAG2O75638 210 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 CD3EP07766 207 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 CST5P28325 142 aaPredicted RBP9.47□□□□□ -0.89
CLCN4-202ENST00000380833 FOXL2P58012 376 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 FMODQ06828 376 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 TWIST1Q15672 202 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 C12orf73Q69YU5 71 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 SLC36A1Q7Z2H8 476 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 C5orf17Q8NAS9 161 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 SLC25A43Q8WUT9 341 aaPredicted RBP9.47□□□□□ -0.89
CLCN4-202ENST00000380833 LOXL4Q96JB6 756 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 TMEM204Q9BSN7 226 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 MYO18AQ92614 2054 aaKnown RBP9.47□□□□□ -0.89
CLCN4-202ENST00000380833 TRAV17A0A0B4J275 112 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 HMGN4O00479 90 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 PITX3O75364 302 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 EML2O95834 649 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 ADRA2AP08913 450 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 COL10A1Q03692 680 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 C1orf194Q5T5A4 169 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 Q6ZSR9 355 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 TTC9CQ8N5M4 171 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 ZNF502Q8TBZ5 544 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 TMUB1Q9BVT8 246 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 SLCO1C1Q9NYB5 712 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 TBL2Q9Y4P3 447 aaKnown RBP9.47□□□□□ -0.89
CLCN4-202ENST00000380833 TMEM272A0A1B0GTI8 110 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 GREM1O60565 184 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 TNFRSF1AP19438 455 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 REG1BP48304 166 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 EWSR1Q01844 656 aaKnown RBP eCLIP9.47□□□□□ -0.89
CLCN4-202ENST00000380833 HIST1H1AQ02539 215 aaPredicted RBP9.47□□□□□ -0.89
CLCN4-202ENST00000380833 EIF3IQ13347 325 aaKnown RBP9.47□□□□□ -0.89
CLCN4-202ENST00000380833 ACSF3Q4G176 576 aaPredicted RBP9.47□□□□□ -0.89
CLCN4-202ENST00000380833 FNDC7Q5VTL7 733 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 OR4D9Q8NGE8 314 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 TM4SF19Q96DZ7 209 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 HARBI1Q96MB7 349 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 FOXB1Q99853 325 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 PPP1CAP62136 330 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 VMA21Q3ZAQ7 101 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 RTN4RQ9BZR6 473 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 OCIAD1Q9NX40 245 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 MYH4Q9Y623 1939 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 RGPD8O14715 1765 aaPredicted RBP9.47□□□□□ -0.89
CLCN4-202ENST00000380833 A0A087WWC5 75 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 PPIAL4DF5H284 164 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 PLPP2O43688 288 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 SRIP30626 198 aa9.47□□□□□ -0.89
CLCN4-202ENST00000380833 ALG1L2C9J202 215 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 K7ESF4 209 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 SLAQ13239 276 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 OR1F12Q8NHA8 337 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 KCNS1Q96KK3 526 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 HDHD3Q9BSH5 251 aaPredicted RBP9.46□□□□□ -0.89
CLCN4-202ENST00000380833 RBKSQ9H477 322 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 THYN1Q9P016 225 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 SERGEFQ9UGK8 458 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 FAM181BA6NEQ2 426 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 ZNF735P0CB33 412 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 FLYWCH2Q96CP2 140 aaKnown RBP9.46□□□□□ -0.89
CLCN4-202ENST00000380833 LYRM4Q9HD34 91 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 C3orf85A0A1B0GTC6 90 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 CTXND1A0A1B0GTU2 59 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 ITGBL1O95965 494 aaPredicted RBP9.46□□□□□ -0.89
CLCN4-202ENST00000380833 SRSF6Q13247 344 aaKnown RBP9.46□□□□□ -0.89
CLCN4-202ENST00000380833 XKR7Q5GH72 579 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms