RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 CAPGP40121 348 aa13.54□□□□□ -0.24
HMGN1-204ENST00000380749 DGCR2P98153 550 aa13.54□□□□□ -0.24
HMGN1-204ENST00000380749 ST3GAL4Q11206 333 aa13.54□□□□□ -0.24
HMGN1-204ENST00000380749 LRRC36Q1X8D7 754 aa13.54□□□□□ -0.24
HMGN1-204ENST00000380749 GAPTQ8N292 157 aa13.54□□□□□ -0.24
HMGN1-204ENST00000380749 FAM71E2Q8N5Q1 922 aa13.54□□□□□ -0.24
HMGN1-204ENST00000380749 PACRGLQ8N7B6 248 aa13.54□□□□□ -0.24
HMGN1-204ENST00000380749 ZNF485Q8NCK3 441 aa13.54□□□□□ -0.24
HMGN1-204ENST00000380749 OR5M8Q8NGP6 311 aa13.54□□□□□ -0.24
HMGN1-204ENST00000380749 OR1L1Q8NH94 360 aa13.54□□□□□ -0.24
HMGN1-204ENST00000380749 DERL3Q96Q80 235 aa13.54□□□□□ -0.24
HMGN1-204ENST00000380749 BANF2Q9H503 90 aa13.54□□□□□ -0.24
HMGN1-204ENST00000380749 PLSCR3Q9NRY6 295 aa13.54□□□□□ -0.24
HMGN1-204ENST00000380749 DNAH7Q8WXX0 4024 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 ZNF736B4DX44 427 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-204ENST00000380749 SC5DO75845 299 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 GLAP06280 429 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 OR5H8P0DN80 308 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 FUT3P21217 361 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 MAPK3P27361 379 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-204ENST00000380749 DOC2BQ14184 412 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 DEFB136Q30KP8 78 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 CT45A1Q5HYN5 189 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 STEAP3Q658P3 488 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 DHRSXQ8N5I4 330 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 RNF152Q8N8N0 203 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 CT45A3Q8NHU0 189 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 TFAP2CQ92754 450 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 Q96M66 194 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 DCLRE1BQ9H816 532 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 TAF9BQ9HBM6 251 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 KCNIP1Q9NZI2 227 aa13.53□□□□□ -0.24
HMGN1-204ENST00000380749 CNOT2Q9NZN8 540 aaKnown RBP13.53□□□□□ -0.24
HMGN1-204ENST00000380749 LANCL1O43813 399 aa13.52□□□□□ -0.25
HMGN1-204ENST00000380749 RAMP3O60896 148 aa13.52□□□□□ -0.25
HMGN1-204ENST00000380749 RCC1P18754 421 aaPredicted RBP13.52□□□□□ -0.25
HMGN1-204ENST00000380749 CDX1P47902 265 aaPredicted RBP13.52□□□□□ -0.25
HMGN1-204ENST00000380749 LSAMPQ13449 338 aa13.52□□□□□ -0.25
HMGN1-204ENST00000380749 MMDQ15546 238 aa13.52□□□□□ -0.25
HMGN1-204ENST00000380749 LCNL1Q6ZST4 164 aa13.52□□□□□ -0.25
HMGN1-204ENST00000380749 ZNF554Q86TJ5 538 aa13.52□□□□□ -0.25
HMGN1-204ENST00000380749 GGHQ92820 318 aa13.52□□□□□ -0.25
HMGN1-204ENST00000380749 HSPB9Q9BQS6 159 aa13.52□□□□□ -0.25
HMGN1-204ENST00000380749 UQCC2Q9BRT2 126 aa13.52□□□□□ -0.25
HMGN1-204ENST00000380749 ABHD14AQ9BUJ0 271 aa13.52□□□□□ -0.25
HMGN1-204ENST00000380749 CST11Q9H112 138 aa13.52□□□□□ -0.25
HMGN1-204ENST00000380749 OR2S2Q9NQN1 319 aa13.52□□□□□ -0.25
HMGN1-204ENST00000380749 ZNF107Q9UII5 783 aaPredicted RBP13.52□□□□□ -0.25
HMGN1-204ENST00000380749 ZNF580Q9UK33 172 aa13.52□□□□□ -0.25
HMGN1-204ENST00000380749 JPT1Q9UK76 154 aa13.52□□□□□ -0.25
HMGN1-204ENST00000380749 RYR3Q15413 4870 aa13.52□□□□□ -0.25
HMGN1-204ENST00000380749 UBE2QL1A1L167 161 aa13.51□□□□□ -0.25
HMGN1-204ENST00000380749 PDCD6O75340 191 aa13.51□□□□□ -0.25
HMGN1-204ENST00000380749 IGHG4P01861 327 aa13.51□□□□□ -0.25
HMGN1-204ENST00000380749 CELP19835 753 aa13.51□□□□□ -0.25
HMGN1-204ENST00000380749 MYF6P23409 242 aa13.51□□□□□ -0.25
HMGN1-204ENST00000380749 ZNF134P52741 427 aa13.51□□□□□ -0.25
HMGN1-204ENST00000380749 WNT4P56705 351 aa13.51□□□□□ -0.25
HMGN1-204ENST00000380749 KIR2DS1Q14954 304 aa13.51□□□□□ -0.25
HMGN1-204ENST00000380749 C9orf66Q5T8R8 295 aa13.51□□□□□ -0.25
HMGN1-204ENST00000380749 C8orf59Q8N0T1 100 aaPredicted RBP13.51□□□□□ -0.25
HMGN1-204ENST00000380749 C4orf3Q8WVX3 66 aa13.51□□□□□ -0.25
HMGN1-204ENST00000380749 MBNL3Q9NUK0 354 aaKnown RBP13.51□□□□□ -0.25
HMGN1-204ENST00000380749 GHRLQ9UBU3 117 aa13.51□□□□□ -0.25
HMGN1-204ENST00000380749 RGS11O94810 467 aa13.5□□□□□ -0.25
HMGN1-204ENST00000380749 IGF1P05019 195 aa13.5□□□□□ -0.25
HMGN1-204ENST00000380749 CD1AP06126 327 aa13.5□□□□□ -0.25
HMGN1-204ENST00000380749 SLC2A2P11168 524 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-204ENST00000380749 LUMP51884 338 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-204ENST00000380749 F2RL1P55085 397 aa13.5□□□□□ -0.25
HMGN1-204ENST00000380749 ADARB1P78563 741 aaKnown RBP13.5□□□□□ -0.25
HMGN1-204ENST00000380749 CFHR3Q02985 330 aa13.5□□□□□ -0.25
HMGN1-204ENST00000380749 AHSA2Q719I0 299 aa13.5□□□□□ -0.25
HMGN1-204ENST00000380749 FAM46BQ96A09 425 aa13.5□□□□□ -0.25
HMGN1-204ENST00000380749 CHCHD6Q9BRQ6 235 aa13.5□□□□□ -0.25
HMGN1-204ENST00000380749 UBBP0CG47 229 aa13.49□□□□□ -0.25
HMGN1-204ENST00000380749 VHLP40337 213 aa13.49□□□□□ -0.25
HMGN1-204ENST00000380749 GNMTQ14749 295 aa13.49□□□□□ -0.25
HMGN1-204ENST00000380749 MORN2Q502X0 79 aa13.49□□□□□ -0.25
HMGN1-204ENST00000380749 NKAPLQ5M9Q1 402 aa13.49□□□□□ -0.25
HMGN1-204ENST00000380749 SIGIRRQ6IA17 410 aa13.49□□□□□ -0.25
HMGN1-204ENST00000380749 LYPD6Q86Y78 171 aa13.49□□□□□ -0.25
HMGN1-204ENST00000380749 MRPL30Q8TCC3 161 aaKnown RBP13.49□□□□□ -0.25
HMGN1-204ENST00000380749 KCTD7Q96MP8 289 aa13.49□□□□□ -0.25
HMGN1-204ENST00000380749 PSORS1C1Q9UIG5 152 aa13.49□□□□□ -0.25
HMGN1-204ENST00000380749 SEC14L6B5MCN3 397 aa13.48□□□□□ -0.25
HMGN1-204ENST00000380749 PSMB8P28062 276 aa13.48□□□□□ -0.25
HMGN1-204ENST00000380749 PPP1CCP36873 323 aaKnown RBP13.48□□□□□ -0.25
HMGN1-204ENST00000380749 ACTBP60709 375 aa13.48□□□□□ -0.25
HMGN1-204ENST00000380749 HTD2P86397 168 aa13.48□□□□□ -0.25
HMGN1-204ENST00000380749 OR52L2PQ8NGH6 319 aa13.48□□□□□ -0.25
HMGN1-204ENST00000380749 GALMQ96C23 342 aa13.48□□□□□ -0.25
HMGN1-204ENST00000380749 WWC2-AS2Q96NR7 200 aa13.48□□□□□ -0.25
HMGN1-204ENST00000380749 ZNF251Q9BRH9 671 aa13.48□□□□□ -0.25
HMGN1-204ENST00000380749 MRPL20Q9BYC9 149 aaKnown RBP13.48□□□□□ -0.25
HMGN1-204ENST00000380749 ERGIC3Q9Y282 383 aa13.48□□□□□ -0.25
HMGN1-204ENST00000380749 YPEL1O60688 119 aa13.47□□□□□ -0.25
HMGN1-204ENST00000380749 HLA-DRB1P01911 266 aa13.47□□□□□ -0.25
HMGN1-204ENST00000380749 FHL3Q13643 280 aa13.47□□□□□ -0.25
HMGN1-204ENST00000380749 RCN1Q15293 331 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms