RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 H2AFB1P0C5Y9 115 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 H2AFB2P0C5Z0 115 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 CLEC2LP0C7M8 214 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 IGHV3-43DP0DP04 118 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 SLC2A2P11168 524 aaPredicted RBP7.45□□□□□ -1.22
HMGN1-202ENST00000380747 JUNBP17275 347 aaPredicted RBP7.45□□□□□ -1.22
HMGN1-202ENST00000380747 RCC1P18754 421 aaPredicted RBP7.45□□□□□ -1.22
HMGN1-202ENST00000380747 MDKP21741 143 aaPredicted RBP7.45□□□□□ -1.22
HMGN1-202ENST00000380747 CEACAM3P40198 252 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 MXD1Q05195 221 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 PLA2G7Q13093 441 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 AANATQ16613 207 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 HLA-DRB5Q30154 266 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 ANKRD39Q53RE8 183 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 TPTE2P1Q5T6R2 138 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 FAM53AQ6NSI3 398 aaPredicted RBP7.45□□□□□ -1.22
HMGN1-202ENST00000380747 TRAT1Q6PIZ9 186 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 TPRA1Q86W33 373 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 OR56B1Q8NGI3 324 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 OR4F5Q8NH21 305 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 OR1L1Q8NH94 360 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 MRPL30Q8TCC3 161 aaKnown RBP7.45□□□□□ -1.22
HMGN1-202ENST00000380747 CREB3L1Q96BA8 519 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 LINC00574Q9H8X3 128 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 TAF9BQ9HBM6 251 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 RAB9BQ9NP90 201 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 FBLN5Q9UBX5 448 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 PSG11Q9UQ72 335 aa7.45□□□□□ -1.22
HMGN1-202ENST00000380747 BUB1B-PAK6H3BSN5 160 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 LDLRAD4O15165 306 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 AIREO43918 545 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 NDUFA7O95182 113 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 HBZP02008 142 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 SDC2P34741 201 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 ARHGDIBP52566 201 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 EFNB2P52799 333 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 RPL15P61313 204 aaKnown RBP7.44□□□□□ -1.22
HMGN1-202ENST00000380747 DEFA6Q01524 100 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 SLC16A12Q6ZSM3 486 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 Q6ZTK2 550 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 C5orf24Q7Z6I8 188 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 NR2C2APQ86WQ0 139 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 TMEM219Q86XT9 240 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 GAPTQ8N292 157 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 FAM89BQ8N5H3 189 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 OR10V1Q8NGI7 309 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 OR52M1Q8NGK5 317 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 PIFOQ8TCI5 191 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 TOMM40LQ969M1 308 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 RPEQ96AT9 228 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 YIPF6Q96EC8 236 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 ARHGAP5-AS1Q96IT6 56 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 CENPOQ9BU64 300 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 MMP28Q9H239 520 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 BEX1Q9HBH7 125 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 GFOD1Q9NXC2 390 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 GNG12Q9UBI6 72 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 AK3Q9UIJ7 227 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 DAPK2Q9UIK4 370 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 AMMECR1Q9Y4X0 333 aaPredicted RBP7.44□□□□□ -1.22
HMGN1-202ENST00000380747 NBEAL2Q6ZNJ1 2754 aa7.44□□□□□ -1.22
HMGN1-202ENST00000380747 KMT2CQ8NEZ4 4911 aaKnown RBP7.44□□□□□ -1.22
HMGN1-202ENST00000380747 A0A075B6Q4 140 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 METTL21EPA6NDL7 271 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 A6NDX4 124 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 FOXI3A8MTJ6 420 aaPredicted RBP7.43□□□□□ -1.22
HMGN1-202ENST00000380747 VGLL3A8MV65 326 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 IGLV1-40P01703 118 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 CD24P25063 80 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 BRS3P32247 399 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 TMEM50BP56557 158 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 LSM3P62310 102 aaKnown RBP7.43□□□□□ -1.22
HMGN1-202ENST00000380747 MADCAM1Q13477 382 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 MOGAT2Q3SYC2 334 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 TIMM50Q3ZCQ8 353 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 SFXN4Q6P4A7 337 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 OR10X1Q8NGY0 326 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 RAB3CQ96E17 227 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 CMSS1Q9BQ75 279 aaKnown RBP7.43□□□□□ -1.22
HMGN1-202ENST00000380747 HDHD3Q9BSH5 251 aaPredicted RBP7.43□□□□□ -1.22
HMGN1-202ENST00000380747 PECRQ9BY49 303 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 ATG5Q9H1Y0 275 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 OR2S2Q9NQN1 319 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 MBNL3Q9NUK0 354 aaKnown RBP7.43□□□□□ -1.22
HMGN1-202ENST00000380747 ABRACLQ9P1F3 81 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 HSF4Q9ULV5 492 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 TCF19Q9Y242 345 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 U3KQE9 123 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 DSCAML1Q8TD84 2053 aa7.43□□□□□ -1.22
HMGN1-202ENST00000380747 CLPSL1A2RUU4 121 aa7.42□□□□□ -1.22
HMGN1-202ENST00000380747 TRIM64CA6NLI5 447 aa7.42□□□□□ -1.22
HMGN1-202ENST00000380747 OOSP1A8MZH6 123 aa7.42□□□□□ -1.22
HMGN1-202ENST00000380747 LY6LH3BQJ8 138 aa7.42□□□□□ -1.22
HMGN1-202ENST00000380747 CHST1O43916 411 aa7.42□□□□□ -1.22
HMGN1-202ENST00000380747 NAPSAO96009 420 aa7.42□□□□□ -1.22
HMGN1-202ENST00000380747 CD3GP09693 182 aa7.42□□□□□ -1.22
HMGN1-202ENST00000380747 SMIM18P0DKX4 95 aa7.42□□□□□ -1.22
HMGN1-202ENST00000380747 IL3RAP26951 378 aa7.42□□□□□ -1.22
HMGN1-202ENST00000380747 TGFBR1P36897 503 aa7.42□□□□□ -1.22
HMGN1-202ENST00000380747 MNDAP41218 407 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms