RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 ERVK11-1P61568 191 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 ARL16Q0P5N6 197 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 ZNF585BQ52M93 769 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 FBXW9Q5XUX1 488 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 P4HA3Q7Z4N8 544 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.25□□□□□ -0.93
BEST1-201ENST00000378043 PRR18Q8N4B5 295 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 CLDND2Q8NHS1 167 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 DEFB127Q9H1M4 99 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 CACNG5Q9UF02 275 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 ZNF727A8MUV8 499 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 SIRPB1O00241 398 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 OR2H2O95918 312 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 S100A6P06703 90 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 ZNF14P17017 642 aaPredicted RBP9.25□□□□□ -0.93
BEST1-201ENST00000378043 FABP9Q0Z7S8 132 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 SLC10A1Q14973 349 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 ALKBH6Q3KRA9 238 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 ZNF506Q5JVG8 444 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 AKR1C8PQ5T2L2 129 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 HEPN1Q6WQI6 88 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 ZNF497Q6ZNH5 498 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 THNSL2Q86YJ6 484 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 CYB561D1Q8N8Q1 229 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 SCCPDHQ8NBX0 429 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 RAB39BQ96DA2 213 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 MUCL1Q96DR8 90 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 WDYHV1Q96HA8 205 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 SPRR3Q9UBC9 169 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 PPP1R3CQ9UQK1 317 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 DOCK11Q5JSL3 2073 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 IGHV3-64DA0A0J9YX35 117 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 OR2C1O95371 312 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 ERVS71-1P61550 626 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 TMEM164Q5U3C3 297 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 HAPLN4Q86UW8 402 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 STX12Q86Y82 276 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 SNIP1Q8TAD8 396 aaKnown RBP9.25□□□□□ -0.93
BEST1-201ENST00000378043 RAB40CQ96S21 281 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 RSG1Q9BU20 258 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 METTL1Q9UBP6 276 aaKnown RBP9.25□□□□□ -0.93
BEST1-201ENST00000378043 KLF13Q9Y2Y9 288 aaPredicted RBP9.25□□□□□ -0.93
BEST1-201ENST00000378043 WSB1Q9Y6I7 421 aa9.25□□□□□ -0.93
BEST1-201ENST00000378043 HSPB1P04792 205 aaKnown RBP9.24□□□□□ -0.93
BEST1-201ENST00000378043 OR8U8P0C7N1 319 aa9.24□□□□□ -0.93
BEST1-201ENST00000378043 SELEP16581 610 aa9.24□□□□□ -0.93
BEST1-201ENST00000378043 S100GP29377 79 aa9.24□□□□□ -0.93
BEST1-201ENST00000378043 CEBPGP53567 150 aa9.24□□□□□ -0.93
BEST1-201ENST00000378043 ATP1A1-AS1Q5TC04 95 aa9.24□□□□□ -0.93
BEST1-201ENST00000378043 LSM10Q969L4 123 aaKnown RBP9.24□□□□□ -0.93
BEST1-201ENST00000378043 OR2J1Q9GZK6 312 aa9.24□□□□□ -0.93
BEST1-201ENST00000378043 SEBOXQ9HB31 216 aaPredicted RBP9.24□□□□□ -0.93
BEST1-201ENST00000378043 TREM2Q9NZC2 230 aa9.24□□□□□ -0.93
BEST1-201ENST00000378043 KLRC4-KLRK1H3BQV0 150 aa9.24□□□□□ -0.93
BEST1-201ENST00000378043 CDX4O14627 284 aaPredicted RBP9.24□□□□□ -0.93
BEST1-201ENST00000378043 SYNGR2O43760 224 aa9.24□□□□□ -0.93
BEST1-201ENST00000378043 RPL23AP62750 156 aaKnown RBP9.24□□□□□ -0.93
BEST1-201ENST00000378043 TLE4Q04727 773 aa9.24□□□□□ -0.93
BEST1-201ENST00000378043 SLC16A13Q7RTY0 426 aa9.24□□□□□ -0.93
BEST1-201ENST00000378043 VSIRQ9H7M9 311 aa9.24□□□□□ -0.93
BEST1-201ENST00000378043 RPRMQ9NS64 109 aa9.24□□□□□ -0.93
BEST1-201ENST00000378043 MBNL3Q9NUK0 354 aaKnown RBP9.24□□□□□ -0.93
BEST1-201ENST00000378043 TRAV1-1A0A0B4J248 108 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 LRP5LA4QPB2 252 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 CDIPTO14735 213 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 SMPD2O60906 423 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 DFFBO76075 338 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 CNOT4O95628 575 aaKnown RBP9.23□□□□□ -0.93
BEST1-201ENST00000378043 METTL15P1P0C7V9 234 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 IAPPP10997 89 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 B2MP61769 119 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 DPPA3Q6W0C5 159 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 ZNF429Q86V71 674 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 RBMXL1Q96E39 390 aaKnown RBP9.23□□□□□ -0.93
BEST1-201ENST00000378043 RTL8AQ9BWD3 113 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 TRAPPC2LQ9UL33 140 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 PGA5P0DJD9 388 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 NQO2P16083 231 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 MDH2P40926 338 aaKnown RBP9.23□□□□□ -0.93
BEST1-201ENST00000378043 DLK1P80370 383 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 ZNF146Q15072 292 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 ZNF726P1Q15940 193 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 SSX7Q7RTT5 188 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 C1QL4Q86Z23 238 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 ZNF525Q8N782 197 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 RNASE11Q8TAA1 199 aaKnown RBP9.23□□□□□ -0.93
BEST1-201ENST00000378043 NANPQ8TBE9 248 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 UNKLQ9H9P5 680 aaKnown RBP9.23□□□□□ -0.93
BEST1-201ENST00000378043 MMP24Q9Y5R2 645 aa9.23□□□□□ -0.93
BEST1-201ENST00000378043 WDR1O75083 606 aa9.22□□□□□ -0.93
BEST1-201ENST00000378043 S100A8P05109 93 aa9.22□□□□□ -0.93
BEST1-201ENST00000378043 TAGLN2P37802 199 aaKnown RBP9.22□□□□□ -0.93
BEST1-201ENST00000378043 PPP1CBP62140 327 aa9.22□□□□□ -0.93
BEST1-201ENST00000378043 HOXA4Q00056 320 aaPredicted RBP9.22□□□□□ -0.93
BEST1-201ENST00000378043 FAM53AQ6NSI3 398 aaPredicted RBP9.22□□□□□ -0.93
BEST1-201ENST00000378043 ZNF343Q6P1L6 599 aa9.22□□□□□ -0.93
BEST1-201ENST00000378043 MOB1BQ7L9L4 216 aa9.22□□□□□ -0.93
BEST1-201ENST00000378043 DRAM1Q8N682 238 aa9.22□□□□□ -0.93
BEST1-201ENST00000378043 NANOS1Q8WY41 292 aaKnown RBP9.22□□□□□ -0.93
BEST1-201ENST00000378043 WIPI2Q9Y4P8 454 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms