RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 TMEM158Q8WZ71 300 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 GNG12Q9UBI6 72 aa10.73□□□□□ -0.69
CKAP2-202ENST00000378034 BTBD17A6NE02 478 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 OOSP1A8MZH6 123 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 BUB1B-PAK6H3BSN5 160 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 RGS11O94810 467 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 RNASE1P07998 156 aaKnown RBP10.72□□□□□ -0.69
CKAP2-202ENST00000378034 DTYMKP23919 212 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 SOX6P35712 828 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 HLA-DRB3P79483 266 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 Q6ZPA2 131 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 Q6ZS49 121 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 UBALD1Q8TB05 177 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 OR2S2Q9NQN1 319 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 TRDCB7Z8K6 153 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 LY6LH3BQJ8 138 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 XRCC3O43542 346 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 YPEL1O60688 119 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 FCGR3AP08637 254 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 KIR2DS4P43632 304 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 DYNLT3P51808 116 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 ARHGDIBP52566 201 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 KIR2DS1Q14954 304 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 SPCS2Q15005 226 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 SSX2Q16385 188 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 LRRC75BQ2VPJ9 315 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 LDLRAD2Q5SZI1 272 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 LEAP2Q969E1 77 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 ISOC1Q96CN7 298 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 YPEL2Q96QA6 119 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 OCSTAMPQ9BR26 566 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 CEPT1Q9Y6K0 416 aa10.72□□□□□ -0.69
CKAP2-202ENST00000378034 TRAV18A0A075B6X5 111 aa10.71□□□□□ -0.69
CKAP2-202ENST00000378034 DIRAS3O95661 229 aa10.71□□□□□ -0.69
CKAP2-202ENST00000378034 APOA1P02647 267 aa10.71□□□□□ -0.69
CKAP2-202ENST00000378034 RPL15P61313 204 aaKnown RBP10.71□□□□□ -0.69
CKAP2-202ENST00000378034 MORN2Q502X0 79 aa10.71□□□□□ -0.69
CKAP2-202ENST00000378034 UTF1Q5T230 341 aa10.71□□□□□ -0.69
CKAP2-202ENST00000378034 CCDC144NLQ6NUI1 221 aa10.71□□□□□ -0.69
CKAP2-202ENST00000378034 OR4A4PQ8NGN8 299 aa10.71□□□□□ -0.69
CKAP2-202ENST00000378034 OR10X1Q8NGY0 326 aa10.71□□□□□ -0.69
CKAP2-202ENST00000378034 SSX3Q99909 188 aa10.71□□□□□ -0.69
CKAP2-202ENST00000378034 COMMD3Q9UBI1 195 aa10.71□□□□□ -0.69
CKAP2-202ENST00000378034 IGHV3-43A0A0B4J1X8 118 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 H3BMQ9 156 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 IGHV4-59P01825 116 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 IGHV3-43DP0DP04 118 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 IL3RAP26951 378 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 GNG10P50151 68 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 GNG2P59768 71 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 MADCAM1Q13477 382 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 TPTE2P1Q5T6R2 138 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 C16orf87Q6PH81 154 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 SLC25A48Q6ZT89 311 aaKnown RBP10.7□□□□□ -0.7
CKAP2-202ENST00000378034 DYNAPQ8N1N2 210 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 ZNF439Q8NDP4 499 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 AUNIPQ9H7T9 357 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 HILPDAQ9Y5L2 63 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 TMEM235A6NFC5 223 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 IGHV3-7P01780 117 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 ZBTB25P24278 435 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 MNDAP41218 407 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 OR52L2PQ8NGH6 319 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 OR10V1Q8NGI7 309 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 DYNC2LI1Q8TCX1 351 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 IL1F10Q8WWZ1 152 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 DUX5Q96PT3 197 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 ABCB10Q9NRK6 738 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 CCDC59Q9P031 241 aaKnown RBP10.7□□□□□ -0.7
CKAP2-202ENST00000378034 VPREB3Q9UKI3 123 aa10.7□□□□□ -0.7
CKAP2-202ENST00000378034 SMIM31A0A1B0GVY4 71 aa10.69□□□□□ -0.7
CKAP2-202ENST00000378034 H3BUX3 64 aa10.69□□□□□ -0.7
CKAP2-202ENST00000378034 ZNF701M0R085 212 aaPredicted RBP10.69□□□□□ -0.7
CKAP2-202ENST00000378034 ITGB1BP1O14713 200 aa10.69□□□□□ -0.7
CKAP2-202ENST00000378034 FABP7O15540 132 aa10.69□□□□□ -0.7
CKAP2-202ENST00000378034 SCTP09683 121 aa10.69□□□□□ -0.7
CKAP2-202ENST00000378034 BRS3P32247 399 aa10.69□□□□□ -0.7
CKAP2-202ENST00000378034 RAB7AP51149 207 aa10.69□□□□□ -0.7
CKAP2-202ENST00000378034 SRSF2Q01130 221 aaKnown RBP10.69□□□□□ -0.7
CKAP2-202ENST00000378034 KRTAP24-1Q3LI83 254 aa10.69□□□□□ -0.7
CKAP2-202ENST00000378034 TMEM69Q5SWH9 247 aa10.69□□□□□ -0.7
CKAP2-202ENST00000378034 LIAT1Q6ZQX7 453 aa10.69□□□□□ -0.7
CKAP2-202ENST00000378034 RPEQ96AT9 228 aa10.69□□□□□ -0.7
CKAP2-202ENST00000378034 CHIAQ9BZP6 476 aa10.69□□□□□ -0.7
CKAP2-202ENST00000378034 ELF5Q9UKW6 265 aaPredicted RBP10.69□□□□□ -0.7
CKAP2-202ENST00000378034 RNF212BA8MTL3 300 aa10.68□□□□□ -0.7
CKAP2-202ENST00000378034 LPLP06858 475 aa10.68□□□□□ -0.7
CKAP2-202ENST00000378034 PPP1CCP36873 323 aaKnown RBP10.68□□□□□ -0.7
CKAP2-202ENST00000378034 ZNF137PP52743 207 aa10.68□□□□□ -0.7
CKAP2-202ENST00000378034 CT45A1Q5HYN5 189 aa10.68□□□□□ -0.7
CKAP2-202ENST00000378034 C5orf24Q7Z6I8 188 aa10.68□□□□□ -0.7
CKAP2-202ENST00000378034 CT45A3Q8NHU0 189 aa10.68□□□□□ -0.7
CKAP2-202ENST00000378034 TOMM40LQ969M1 308 aa10.68□□□□□ -0.7
CKAP2-202ENST00000378034 CABLES2Q9BTV7 478 aa10.68□□□□□ -0.7
CKAP2-202ENST00000378034 ABHD14AQ9BUJ0 271 aa10.68□□□□□ -0.7
CKAP2-202ENST00000378034 GHITMQ9H3K2 345 aa10.68□□□□□ -0.7
CKAP2-202ENST00000378034 ATRQ13535 2644 aa10.68□□□□□ -0.7
CKAP2-202ENST00000378034 A0A1W2PPE3 182 aa10.68□□□□□ -0.7
CKAP2-202ENST00000378034 CCDC160A6NGH7 325 aa10.68□□□□□ -0.7
CKAP2-202ENST00000378034 HSPA12AO43301 675 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms