RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 SPATA46Q5T0L3 261 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 NCMAPQ5T1S8 102 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 ZNF343Q6P1L6 599 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 Q6P435 159 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 C1orf210Q8IVY1 113 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 LSM10Q969L4 123 aaKnown RBP12.35□□□□□ -0.43
MSH5-201ENST00000375703 RSG1Q9BU20 258 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 PSENENQ9NZ42 101 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 GNG13Q9P2W3 67 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 TRAV1-1A0A0B4J248 108 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 IGLV2-14P01704 120 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 IAPPP10997 89 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 ZNF16P17020 682 aaPredicted RBP12.35□□□□□ -0.43
MSH5-201ENST00000375703 ELOBQ15370 118 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 DDA1Q9BW61 102 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 BCL2L14Q9BZR8 327 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 RPRMQ9NS64 109 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 TRAPPC2LQ9UL33 140 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 URGCP-MRPS24S4R325 110 aa12.35□□□□□ -0.43
MSH5-201ENST00000375703 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.34□□□□□ -0.43
MSH5-201ENST00000375703 J3QT63 122 aa12.34□□□□□ -0.43
MSH5-201ENST00000375703 ATXN7O15265 892 aaPredicted RBP12.34□□□□□ -0.43
MSH5-201ENST00000375703 SLC35E3Q7Z769 313 aa12.34□□□□□ -0.43
MSH5-201ENST00000375703 Q8WTZ3 238 aa12.34□□□□□ -0.43
MSH5-201ENST00000375703 FOXJ2Q9P0K8 574 aa12.34□□□□□ -0.43
MSH5-201ENST00000375703 LOC102723971A0A1B0GUV8 181 aa12.34□□□□□ -0.43
MSH5-201ENST00000375703 SIRPB1O00241 398 aa12.34□□□□□ -0.43
MSH5-201ENST00000375703 WNT2P09544 360 aa12.34□□□□□ -0.43
MSH5-201ENST00000375703 METTL15P1P0C7V9 234 aa12.34□□□□□ -0.43
MSH5-201ENST00000375703 TESK1Q15569 626 aa12.34□□□□□ -0.43
MSH5-201ENST00000375703 ZNF674Q2M3X9 581 aa12.34□□□□□ -0.43
MSH5-201ENST00000375703 DCAF10Q5QP82 559 aa12.34□□□□□ -0.43
MSH5-201ENST00000375703 TMPRSS5Q9H3S3 457 aa12.34□□□□□ -0.43
MSH5-201ENST00000375703 SIRT7Q9NRC8 400 aa12.34□□□□□ -0.43
MSH5-201ENST00000375703 R4GN57 208 aa12.34□□□□□ -0.43
MSH5-201ENST00000375703 CXorf65A6NEN9 183 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 NPIPB11E5RHQ5 1161 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 IL18BPO95998 194 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 CXCL1P09341 107 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 MDH2P40926 338 aaKnown RBP12.33□□□□□ -0.44
MSH5-201ENST00000375703 MDP1Q86V88 176 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 OR1K1Q8NGR3 316 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 UBALD1Q8TB05 177 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 GPR87Q9BY21 358 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 KCNS2Q9ULS6 477 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 MT-CO3P00414 261 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 IGKV1-5P01602 117 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 HOXA5P20719 270 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 GLIPR1P48060 266 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 ERVFRD-1P60508 538 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 RAB11AP62491 216 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 ARL16Q0P5N6 197 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 OR51M1Q9H341 326 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 VSIRQ9H7M9 311 aa12.33□□□□□ -0.44
MSH5-201ENST00000375703 A0A1W2PR80 420 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 C19orf67A6NJJ6 358 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 ZFP92A6NM28 416 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 PPIHO43447 177 aaKnown RBP12.32□□□□□ -0.44
MSH5-201ENST00000375703 WDR1O75083 606 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 YIF1AO95070 293 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 OR2H2O95918 312 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 CD200P41217 278 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 ZNF585BQ52M93 769 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 LCN15Q6UWW0 184 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 VASH2Q86V25 355 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 ZNF525Q8N782 197 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 OR10G4Q8NGN3 311 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 BCL2L2Q92843 193 aaPredicted RBP12.32□□□□□ -0.44
MSH5-201ENST00000375703 RTL8AQ9BWD3 113 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 TREM2Q9NZC2 230 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 MIOXQ9UGB7 285 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 CEACAM6P40199 344 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 MEOX1P50221 254 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 NDUFA6P56556 154 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 SLC10A1Q14973 349 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 ZNF787Q6DD87 383 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 DBX2Q6ZNG2 339 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 ZNF497Q6ZNH5 498 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 MOB1BQ7L9L4 216 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 NANOS1Q8WY41 292 aaKnown RBP12.32□□□□□ -0.44
MSH5-201ENST00000375703 TRIOBPQ9H2D6 2365 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 ZNF407Q9C0G0 2248 aa12.32□□□□□ -0.44
MSH5-201ENST00000375703 TGIF2-C20orf24A0A0A6YYL0 155 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 SP1P08047 785 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 HBG1P69891 147 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 HBG2P69892 147 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 FBXW9Q5XUX1 488 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 SCCPDHQ8NBX0 429 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 ZNF665Q9H7R5 613 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 GP6Q9HCN6 339 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 LIN7CQ9NUP9 197 aaKnown RBP12.31□□□□□ -0.44
MSH5-201ENST00000375703 CISD1Q9NZ45 108 aaKnown RBP12.31□□□□□ -0.44
MSH5-201ENST00000375703 RNF150Q9ULK6 438 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 B4DEV8 164 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 S100PP25815 95 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 LRRC75BQ2VPJ9 315 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 SPANXN5Q5MJ07 72 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 TMEM164Q5U3C3 297 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 MBD3L1Q8WWY6 194 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 PSMG3Q9BT73 122 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms