RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 SULT4A1Q9BR01 284 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 ZNF2Q9BSG1 426 aaPredicted RBP4.04□□□□□ -1.76
USP48-202ENST00000374730 TTTY12Q9BZ98 90 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 PIGMQ9H3S5 423 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 NAA60Q9H7X0 242 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 ZNF286AQ9HBT8 521 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 C12orf4Q9NQ89 552 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 CYTL1Q9NRR1 136 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 SLC7A10Q9NS82 523 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 TMEM100Q9NV29 134 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 RCC2Q9P258 522 aaKnown RBP4.04□□□□□ -1.76
USP48-202ENST00000374730 AK3Q9UIJ7 227 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 KLF13Q9Y2Y9 288 aaPredicted RBP4.04□□□□□ -1.76
USP48-202ENST00000374730 KNTC1P50748 2209 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 ESPL1Q14674 2120 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 MED12LQ86YW9 2145 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 PCNX2A6NKB5 2137 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 GPR179Q6PRD1 2367 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 SPTBN4Q9H254 2564 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 EPG5Q9HCE0 2579 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 PQLC2LA1A4F0 135 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 MSGN1A6NI15 193 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 USP17L23D6RBM5 183 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 TEX46H3BTG2 121 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 CDX4O14627 284 aaPredicted RBP4.03□□□□□ -1.76
USP48-202ENST00000374730 TAAR5O14804 337 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 GEMIN2O14893 280 aaKnown RBP4.03□□□□□ -1.76
USP48-202ENST00000374730 SCO1O75880 301 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 F10P00742 488 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 GAPDHP04406 335 aaKnown RBP4.03□□□□□ -1.76
USP48-202ENST00000374730 HEXAP06865 529 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 SFTPBP07988 381 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 SP1P08047 785 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 SNRNP70P08621 437 aaKnown RBP4.03□□□□□ -1.76
USP48-202ENST00000374730 ZNF728P0DKX0 622 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 FUT3P21217 361 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 ITGA3P26006 1051 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 ARR3P36575 388 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 GLP1RP43220 463 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 MAGEA5P43359 124 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 CAMPP49913 170 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 FGF12P61328 243 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 TMEM187Q14656 261 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 MPV17LQ2QL34 196 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 PIGYQ3MUY2 71 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 BEX5Q5H9J7 111 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 DMRTC1Q5HYR2 192 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 FAM74A1Q5RGS3 127 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 EIF5AL1Q6IS14 154 aaKnown RBP4.03□□□□□ -1.76
USP48-202ENST00000374730 TFAP2EQ6VUC0 442 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 LINC00696Q6ZRV3 163 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 LINC00596Q86U02 117 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 CALHM1Q8IU99 346 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 MCEMP1Q8IX19 187 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 TUSC5Q8IXB3 177 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 BAP18Q8IXM2 172 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 SLC38A6Q8IZM9 456 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 ZNF611Q8N823 705 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 CCDC71LQ8N9Z2 235 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 ZFP62Q8NB50 900 aaPredicted RBP4.03□□□□□ -1.76
USP48-202ENST00000374730 OR56B2PQ8NGI1 322 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 OR51F2Q8NH61 342 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 FNDC9Q8TBE3 224 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 FAM216AQ8WUB2 273 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 HPSE2Q8WWQ2 592 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 PIGCQ92535 297 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 ARL11Q969Q4 196 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 APOBEC3DQ96AK3 386 aaPredicted RBP4.03□□□□□ -1.76
USP48-202ENST00000374730 APH1AQ96BI3 265 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 MOB3AQ96BX8 217 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 HDHD3Q9BSH5 251 aaPredicted RBP4.03□□□□□ -1.76
USP48-202ENST00000374730 FAAP24Q9BTP7 215 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 SUCNR1Q9BXA5 334 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 C1QTNF6Q9BXI9 259 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 HES7Q9BYE0 225 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 SLC5A7Q9GZV3 580 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 LIME1Q9H400 295 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 METTL8Q9H825 291 aaKnown RBP4.03□□□□□ -1.76
USP48-202ENST00000374730 ACKR4Q9NPB9 350 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 ZFP57Q9NU63 452 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 OR5AC2Q9NZP5 309 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 ST3GAL6Q9Y274 331 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 STARD10Q9Y365 291 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 CHD6Q8TD26 2715 aa4.03□□□□□ -1.76
USP48-202ENST00000374730 TRAV34A0A0B4J273 112 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 A0A1B0GUV1 79 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 LOC105371267A0A1B0GV96 52 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 DUXBA0A1W2PPF3 345 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 OR5B21A6NL26 309 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 IFITM10A6NMD0 228 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 ZNF850A8MQ14 1090 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 FAM166BA8MTA8 275 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 C17orf100A8MU93 164 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 MPTX1A8MV57 137 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 KLRC4-KLRK1H3BQV0 150 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 DEDDO75618 318 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 NAPSAO96009 420 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 IFNA21P01568 189 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 GLAP06280 429 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 ZNF806P0C7X5 589 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms