RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 VPS13AQ96RL7 3174 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 TRANK1O15050 2925 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 GAGE12BA1L429 117 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 ZNF850A8MQ14 1090 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 C17orf51A8MQB3 221 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 VENTXO95231 258 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 GOSR1O95249 250 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 ZNF823P16415 610 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 PPP1CBP62140 327 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 TESK1Q15569 626 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 PARM1Q6UWI2 310 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 ADAMTSL4Q6UY14 1074 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 UBALD2Q8IYN6 164 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 MUC15Q8N387 334 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 RPP25LQ8N5L8 163 aaKnown RBP8.19□□□□□ -1.1
SF3A3-201ENST00000373019 SARAFQ96BY9 339 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 RAB11FIP5Q9BXF6 653 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 SAMD10Q9BYL1 202 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 TMEM222Q9H0R3 208 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 ZDHHC11Q9H8X9 412 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 NECAP2Q9NVZ3 263 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 ADAMTS9Q9P2N4 1935 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 C3orf85A0A1B0GTC6 90 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 C1QTNF9BB2RNN3 333 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 ADAM20O43506 726 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 CCR2P41597 374 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 ASCL4Q6XD76 172 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 CDC42EP3Q9UKI2 254 aa8.19□□□□□ -1.1
SF3A3-201ENST00000373019 TBL2Q9Y4P3 447 aaKnown RBP8.19□□□□□ -1.1
SF3A3-201ENST00000373019 KNTC1P50748 2209 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 OR2T8A6NH00 312 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 RNF212BA8MTL3 300 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 TGFBR3LH3BV60 316 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 IFNA1P01562 189 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 CBLN1P23435 193 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 LGALS7P47929 136 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 PSG4Q00888 419 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 NHLH1Q02575 133 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 ELAVL3Q14576 367 aaKnown RBP8.18□□□□□ -1.1
SF3A3-201ENST00000373019 KISS1Q15726 138 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 SGCBQ16585 318 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 C2orf27AQ580R0 203 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 LRRC10Q5BKY1 277 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 TMEM108Q6UXF1 575 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 ZNF596Q8TC21 504 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 ELSPBP1Q96BH3 223 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 NRN1Q9NPD7 142 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 OBP2AQ9NY56 170 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 H3BP45 60 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 SLC35E2P0CK97 266 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 ARF6P62330 175 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 Q0VG73 95 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 NMSQ5H8A3 153 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 ZNF468Q5VIY5 522 aaPredicted RBP8.18□□□□□ -1.1
SF3A3-201ENST00000373019 VWA1Q6PCB0 445 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 NIT1Q86X76 327 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 SELENOHQ8IZQ5 122 aaKnown RBP8.18□□□□□ -1.1
SF3A3-201ENST00000373019 SGMS2Q8NHU3 365 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 TMEM234Q8WY98 164 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 ZNF501Q96CX3 271 aaPredicted RBP8.18□□□□□ -1.1
SF3A3-201ENST00000373019 PLEKHJ1Q9NW61 149 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 DXOO77932 396 aaKnown RBP8.18□□□□□ -1.1
SF3A3-201ENST00000373019 FRMD6-AS1P0C7T7 363 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 ARL16Q0P5N6 197 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 OR4A47Q6IF82 309 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 ABHD12BQ7Z5M8 362 aaPredicted RBP8.18□□□□□ -1.1
SF3A3-201ENST00000373019 HAPLN4Q86UW8 402 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 SIGLECL1Q8N7X8 197 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 FGF14Q92915 247 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 LHX4Q969G2 390 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 ABHD14BQ96IU4 210 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 PSMG3Q9BT73 122 aaPredicted RBP8.18□□□□□ -1.1
SF3A3-201ENST00000373019 TAAR3PQ9P1P4 343 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 SPTBN4Q9H254 2564 aa8.18□□□□□ -1.1
SF3A3-201ENST00000373019 HMGB3O15347 200 aaKnown RBP8.17□□□□□ -1.1
SF3A3-201ENST00000373019 MPPED1O15442 326 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 NPIPB7O75200 414 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 IFNA5P01569 189 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 SRFP11831 508 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 TMEM267Q0VDI3 215 aaPredicted RBP8.17□□□□□ -1.1
SF3A3-201ENST00000373019 AMMECR1LQ6DCA0 310 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 SYT13Q7L8C5 426 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 UEVLDQ8IX04 471 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 ATOH7Q8N100 152 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 PNKDQ8N490 385 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 OR4F5Q8NH21 305 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 NAT6Q93015 286 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 LRFN3Q9BTN0 628 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 COL25A1Q9BXS0 654 aaPredicted RBP8.17□□□□□ -1.1
SF3A3-201ENST00000373019 CEP250Q9BV73 2442 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 CABIN1Q9Y6J0 2220 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 FAM166BA8MTA8 275 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 NPIPA2E9PIF3 369 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 E9PLN8 166 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 C1QTNF9P0C862 333 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 CD99P14209 185 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 GTF3C1Q12789 2109 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 PRAMEF20Q5VT98 475 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 BAGE3Q86Y29 109 aa8.17□□□□□ -1.1
SF3A3-201ENST00000373019 BAGE2Q86Y30 109 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms