RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 GNMTQ14749 295 aa12.16□□□□□ -0.46
SS18L1-202ENST00000370848 BEAN1Q3B7T3 259 aa12.16□□□□□ -0.46
SS18L1-202ENST00000370848 C6orf183Q5T699 404 aa12.16□□□□□ -0.46
SS18L1-202ENST00000370848 Q8N2B8 174 aa12.16□□□□□ -0.46
SS18L1-202ENST00000370848 DTX3Q8N9I9 347 aa12.16□□□□□ -0.46
SS18L1-202ENST00000370848 OR10A7Q8NGE5 316 aa12.16□□□□□ -0.46
SS18L1-202ENST00000370848 WIPF2Q8TF74 440 aaPredicted RBP12.16□□□□□ -0.46
SS18L1-202ENST00000370848 KCTD7Q96MP8 289 aa12.16□□□□□ -0.46
SS18L1-202ENST00000370848 PECRQ9BY49 303 aa12.16□□□□□ -0.46
SS18L1-202ENST00000370848 TAF9BQ9HBM6 251 aa12.16□□□□□ -0.46
SS18L1-202ENST00000370848 ABCB10Q9NRK6 738 aa12.16□□□□□ -0.46
SS18L1-202ENST00000370848 MBNL3Q9NUK0 354 aaKnown RBP12.16□□□□□ -0.46
SS18L1-202ENST00000370848 TCF19Q9Y242 345 aa12.16□□□□□ -0.46
SS18L1-202ENST00000370848 A6NDX4 124 aa12.15□□□□□ -0.46
SS18L1-202ENST00000370848 NOTOA8MTQ0 251 aa12.15□□□□□ -0.46
SS18L1-202ENST00000370848 LEUTXA8MZ59 168 aa12.15□□□□□ -0.46
SS18L1-202ENST00000370848 CSF1P09603 554 aa12.15□□□□□ -0.46
SS18L1-202ENST00000370848 SNRPBP14678 240 aaKnown RBP12.15□□□□□ -0.46
SS18L1-202ENST00000370848 PRRX1P54821 245 aa12.15□□□□□ -0.46
SS18L1-202ENST00000370848 LSM3P62310 102 aaKnown RBP12.15□□□□□ -0.46
SS18L1-202ENST00000370848 SAMD5Q5TGI4 173 aa12.15□□□□□ -0.46
SS18L1-202ENST00000370848 OR52L2PQ8NGH6 319 aa12.15□□□□□ -0.46
SS18L1-202ENST00000370848 CHMP1AQ9HD42 196 aaPredicted RBP12.15□□□□□ -0.46
SS18L1-202ENST00000370848 DAPK2Q9UIK4 370 aa12.15□□□□□ -0.46
SS18L1-202ENST00000370848 RAB22AQ9UL26 194 aa12.15□□□□□ -0.46
SS18L1-202ENST00000370848 PLXNB1O43157 2135 aa12.14□□□□□ -0.47
SS18L1-202ENST00000370848 H3BUI4 141 aa12.14□□□□□ -0.47
SS18L1-202ENST00000370848 SPINT2O43291 252 aa12.14□□□□□ -0.47
SS18L1-202ENST00000370848 NAPSAO96009 420 aa12.14□□□□□ -0.47
SS18L1-202ENST00000370848 HMGN3Q15651 99 aa12.14□□□□□ -0.47
SS18L1-202ENST00000370848 SFXN4Q6P4A7 337 aa12.14□□□□□ -0.47
SS18L1-202ENST00000370848 Q6ZTK2 550 aa12.14□□□□□ -0.47
SS18L1-202ENST00000370848 TPRA1Q86W33 373 aa12.14□□□□□ -0.47
SS18L1-202ENST00000370848 OR4C13Q8NGP0 309 aa12.14□□□□□ -0.47
SS18L1-202ENST00000370848 SETD6Q8TBK2 473 aa12.14□□□□□ -0.47
SS18L1-202ENST00000370848 VCX3AQ9NNX9 186 aa12.14□□□□□ -0.47
SS18L1-202ENST00000370848 GNG12Q9UBI6 72 aa12.14□□□□□ -0.47
SS18L1-202ENST00000370848 KCNK7Q9Y2U2 307 aa12.14□□□□□ -0.47
SS18L1-202ENST00000370848 SIGLEC9Q9Y336 463 aa12.14□□□□□ -0.47
SS18L1-202ENST00000370848 REG1BP48304 166 aa12.13□□□□□ -0.47
SS18L1-202ENST00000370848 DYNLT3P51808 116 aa12.13□□□□□ -0.47
SS18L1-202ENST00000370848 ZNF134P52741 427 aa12.13□□□□□ -0.47
SS18L1-202ENST00000370848 ZNF880Q6PDB4 577 aa12.13□□□□□ -0.47
SS18L1-202ENST00000370848 ZNF439Q8NDP4 499 aa12.13□□□□□ -0.47
SS18L1-202ENST00000370848 OR56B1Q8NGI3 324 aa12.13□□□□□ -0.47
SS18L1-202ENST00000370848 OR52M1Q8NGK5 317 aa12.13□□□□□ -0.47
SS18L1-202ENST00000370848 OR10X1Q8NGY0 326 aa12.13□□□□□ -0.47
SS18L1-202ENST00000370848 LGALS14Q8TCE9 139 aa12.13□□□□□ -0.47
SS18L1-202ENST00000370848 TOMM40LQ969M1 308 aa12.13□□□□□ -0.47
SS18L1-202ENST00000370848 RPEQ96AT9 228 aa12.13□□□□□ -0.47
SS18L1-202ENST00000370848 RBMXL1Q96E39 390 aaKnown RBP12.13□□□□□ -0.47
SS18L1-202ENST00000370848 KCNIP1Q9NZI2 227 aa12.13□□□□□ -0.47
SS18L1-202ENST00000370848 HSF4Q9ULV5 492 aa12.13□□□□□ -0.47
SS18L1-202ENST00000370848 A0A075B6Q4 140 aa12.12□□□□□ -0.47
SS18L1-202ENST00000370848 A0A1W2PPI3 338 aa12.12□□□□□ -0.47
SS18L1-202ENST00000370848 RAB27BO00194 218 aa12.12□□□□□ -0.47
SS18L1-202ENST00000370848 AIREO43918 545 aa12.12□□□□□ -0.47
SS18L1-202ENST00000370848 GNB3P16520 340 aa12.12□□□□□ -0.47
SS18L1-202ENST00000370848 RAB6AP20340 208 aa12.12□□□□□ -0.47
SS18L1-202ENST00000370848 PPP1CCP36873 323 aaKnown RBP12.12□□□□□ -0.47
SS18L1-202ENST00000370848 TRAT1Q6PIZ9 186 aa12.12□□□□□ -0.47
SS18L1-202ENST00000370848 SLC16A12Q6ZSM3 486 aa12.12□□□□□ -0.47
SS18L1-202ENST00000370848 OR5H6Q8NGV6 325 aa12.12□□□□□ -0.47
SS18L1-202ENST00000370848 OR10R2Q8NGX6 335 aa12.12□□□□□ -0.47
SS18L1-202ENST00000370848 OR2T6Q8NHC8 308 aa12.12□□□□□ -0.47
SS18L1-202ENST00000370848 FAM110DQ8TAY7 271 aaPredicted RBP12.12□□□□□ -0.47
SS18L1-202ENST00000370848 NPFFR1Q9GZQ6 430 aa12.12□□□□□ -0.47
SS18L1-202ENST00000370848 OR2S2Q9NQN1 319 aa12.12□□□□□ -0.47
SS18L1-202ENST00000370848 ELF5Q9UKW6 265 aaPredicted RBP12.12□□□□□ -0.47
SS18L1-202ENST00000370848 AMMECR1Q9Y4X0 333 aaPredicted RBP12.12□□□□□ -0.47
SS18L1-202ENST00000370848 MFNGO00587 321 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 HSD17B6O14756 317 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 CEACAM3P40198 252 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 MADCAM1Q13477 382 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 CT45A1Q5HYN5 189 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 IDNKQ5T6J7 187 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 LINC00311Q8N616 119 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 DRAM1Q8N682 238 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 KLHDC1Q8N7A1 406 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 OR56B4Q8NH76 319 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 CT45A3Q8NHU0 189 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 CREB3L1Q96BA8 519 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 RAB3CQ96E17 227 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 CMSS1Q9BQ75 279 aaKnown RBP12.11□□□□□ -0.47
SS18L1-202ENST00000370848 FUNDC2Q9BWH2 189 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 PARP12Q9H0J9 701 aaKnown RBP12.11□□□□□ -0.47
SS18L1-202ENST00000370848 ATG5Q9H1Y0 275 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 ZNF702PQ9H963 129 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 C12orf4Q9NQ89 552 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 SERTAD4Q9NUC0 356 aa12.11□□□□□ -0.47
SS18L1-202ENST00000370848 TRBV6-6A0A0A6YYG2 114 aa12.1□□□□□ -0.47
SS18L1-202ENST00000370848 HIST1H1DP16402 221 aaKnown RBP12.1□□□□□ -0.47
SS18L1-202ENST00000370848 NCS1P62166 190 aa12.1□□□□□ -0.47
SS18L1-202ENST00000370848 HLA-DRB3P79483 266 aa12.1□□□□□ -0.47
SS18L1-202ENST00000370848 HABP2Q14520 560 aaPredicted RBP12.1□□□□□ -0.47
SS18L1-202ENST00000370848 TIMM50Q3ZCQ8 353 aa12.1□□□□□ -0.47
SS18L1-202ENST00000370848 MORN2Q502X0 79 aa12.1□□□□□ -0.47
SS18L1-202ENST00000370848 Q6ZS46 218 aa12.1□□□□□ -0.47
SS18L1-202ENST00000370848 SLC25A48Q6ZT89 311 aaKnown RBP12.1□□□□□ -0.47
SS18L1-202ENST00000370848 REC114Q7Z4M0 266 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms