RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 LIPFP07098 398 aa7.53□□□□□ -1.2
LCA5-201ENST00000369846 OR4A8P0C604 315 aa7.53□□□□□ -1.2
LCA5-201ENST00000369846 FAM157BP0CG42 384 aa7.53□□□□□ -1.2
LCA5-201ENST00000369846 FOXA3P55318 350 aaPredicted RBP7.53□□□□□ -1.2
LCA5-201ENST00000369846 ZNF117Q03924 483 aa7.53□□□□□ -1.2
LCA5-201ENST00000369846 ZNF260Q3ZCT1 412 aa7.53□□□□□ -1.2
LCA5-201ENST00000369846 IBA57Q5T440 356 aaKnown RBP7.53□□□□□ -1.2
LCA5-201ENST00000369846 AMMECR1LQ6DCA0 310 aa7.53□□□□□ -1.2
LCA5-201ENST00000369846 AQP10Q96PS8 301 aa7.53□□□□□ -1.2
LCA5-201ENST00000369846 RNF186Q9NXI6 227 aa7.53□□□□□ -1.2
LCA5-201ENST00000369846 KLK13Q9UKR3 277 aa7.53□□□□□ -1.2
LCA5-201ENST00000369846 VCANP13611 3396 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 IGHV3-15A0A0B4J1V0 119 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 NGFP01138 241 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 ORM1P02763 201 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 VSIG8P0DPA2 414 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 LGALS4P56470 323 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 CLLU1OSQ5K130 101 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.52□□□□□ -1.21
LCA5-201ENST00000369846 OR10D3Q8NH80 312 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 TMEM56Q96MV1 263 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 LHX9Q9NQ69 397 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 BOKQ9UMX3 212 aaPredicted RBP7.52□□□□□ -1.21
LCA5-201ENST00000369846 PIAS3Q9Y6X2 628 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 BCAT2O15382 392 aaPredicted RBP7.52□□□□□ -1.21
LCA5-201ENST00000369846 PITX3O75364 302 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 GCM2O75603 506 aaPredicted RBP7.52□□□□□ -1.21
LCA5-201ENST00000369846 DANCRP0C864 163 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 SPINK2P20155 84 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 FOLR3P41439 243 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 METRNLQ641Q3 311 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 HIST1H2BLQ99880 126 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 C2orf88Q9BSF0 95 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 TMEM70Q9BUB7 260 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 RBKSQ9H477 322 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 NPDC1Q9NQX5 325 aaPredicted RBP7.52□□□□□ -1.21
LCA5-201ENST00000369846 CDC42EP3Q9UKI2 254 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 IGHV3-43A0A0B4J1X8 118 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 TRAV8-6A0A0B4J262 113 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 A8MWL6 223 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 C1QTNF9BB2RNN3 333 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 KBTBD11O94819 623 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 CXorf1O96002 111 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 IGHV3-43DP0DP04 118 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 MAS1LP35410 378 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 PMELP40967 661 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 RAE1P78406 368 aaKnown RBP7.52□□□□□ -1.21
LCA5-201ENST00000369846 RTP5Q14D33 572 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 TBC1D28Q2M2D7 210 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 YRDCQ86U90 279 aaKnown RBP7.52□□□□□ -1.21
LCA5-201ENST00000369846 OR2K2Q8NGT1 345 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 OR10AG1Q8NH19 301 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 OR4X1Q8NH49 305 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 OR5R1Q8NH85 324 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 FGF13Q92913 245 aa7.52□□□□□ -1.21
LCA5-201ENST00000369846 ALKBH3Q96Q83 286 aaPredicted RBP7.52□□□□□ -1.21
LCA5-201ENST00000369846 MSGN1A6NI15 193 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 S1PR2O95136 353 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 PGFP49763 221 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 SPATA46Q5T0L3 261 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 RTL10Q7L3V2 364 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 MORN4Q8NDC4 146 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 NAA38Q9BRA0 125 aaKnown RBP7.51□□□□□ -1.21
LCA5-201ENST00000369846 FGF21Q9NSA1 209 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 ZNF831Q5JPB2 1677 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 C7orf71A4D174 169 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 PXNP49023 591 aaPredicted RBP7.51□□□□□ -1.21
LCA5-201ENST00000369846 RPEQ96AT9 228 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 GALNT14Q96FL9 552 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 SFRP2Q96HF1 295 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 QTRT1Q9BXR0 403 aaKnown RBP7.51□□□□□ -1.21
LCA5-201ENST00000369846 CHST5Q9GZS9 411 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 PPIL1Q9Y3C6 166 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 OR2W1Q9Y3N9 320 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 MIA3Q5JRA6 1907 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 SIP14410 1827 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 TRBV5-3A0A0A0MS03 114 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 TRAV8-2A0A0B4J237 113 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 C19orf67A6NJJ6 358 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 C1QCP02747 245 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 ERGP11308 486 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 TMEM50BP56557 158 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 SRSF3P84103 164 aaKnown RBP7.51□□□□□ -1.21
LCA5-201ENST00000369846 TMEM95Q3KNT9 176 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 CXorf66Q5JRM2 361 aaPredicted RBP7.51□□□□□ -1.21
LCA5-201ENST00000369846 MMD2Q8IY49 270 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 OR4S2Q8NH73 311 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 CITED2Q99967 270 aaPredicted RBP7.51□□□□□ -1.21
LCA5-201ENST00000369846 STRADBQ9C0K7 418 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 MRPL16Q9NX20 251 aaKnown RBP7.51□□□□□ -1.21
LCA5-201ENST00000369846 DHRS3O75911 302 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 PPP2CBP62714 309 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 EIF3IQ13347 325 aaKnown RBP7.51□□□□□ -1.21
LCA5-201ENST00000369846 VASH2Q86V25 355 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 OR1B1Q8NGR6 318 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 ZNF519Q8TB69 540 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 THYN1Q9P016 225 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 HSPB7Q9UBY9 170 aa7.51□□□□□ -1.21
LCA5-201ENST00000369846 NKX6-3A6NJ46 265 aa7.5□□□□□ -1.21
LCA5-201ENST00000369846 TRDCB7Z8K6 153 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms