RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CD46P15529 392 aa12.11□□□□□ -0.47
CD48-201ENST00000368045 TAGLN2P37802 199 aaKnown RBP12.11□□□□□ -0.47
CD48-201ENST00000368045 FABP9Q0Z7S8 132 aa12.11□□□□□ -0.47
CD48-201ENST00000368045 ZNF146Q15072 292 aa12.11□□□□□ -0.47
CD48-201ENST00000368045 TGIF1Q15583 401 aa12.11□□□□□ -0.47
CD48-201ENST00000368045 LPAL2Q16609 132 aa12.11□□□□□ -0.47
CD48-201ENST00000368045 TCTEX1D2Q8WW35 142 aa12.11□□□□□ -0.47
CD48-201ENST00000368045 MBD3L1Q8WWY6 194 aa12.11□□□□□ -0.47
CD48-201ENST00000368045 IL1F10Q8WWZ1 152 aa12.11□□□□□ -0.47
CD48-201ENST00000368045 WDYHV1Q96HA8 205 aa12.11□□□□□ -0.47
CD48-201ENST00000368045 GUCD1Q96NT3 240 aa12.11□□□□□ -0.47
CD48-201ENST00000368045 ZNF251Q9BRH9 671 aa12.11□□□□□ -0.47
CD48-201ENST00000368045 TRAPPC2LQ9UL33 140 aa12.11□□□□□ -0.47
CD48-201ENST00000368045 WDR87Q6ZQQ6 2873 aa12.11□□□□□ -0.47
CD48-201ENST00000368045 A0A1W2PPE3 182 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 SH2D1BO14796 132 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 NXPH3O95157 252 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 OR2H2O95918 312 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 IGKV1-5P01602 117 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 PGA5P0DJD9 388 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 SELEP16581 610 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 SERF2P84101 59 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 TMEM267Q0VDI3 215 aaPredicted RBP12.1□□□□□ -0.47
CD48-201ENST00000368045 C3AR1Q16581 482 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 ZNF525Q8N782 197 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 CYB561D1Q8N8Q1 229 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 ZBTB34Q8NCN2 500 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 ARRDC1-AS1Q9H2J1 176 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 C12orf49Q9H741 205 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 PSENENQ9NZ42 101 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 SPEGQ15772 3267 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 TRIOBPQ9H2D6 2365 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 TMEM210A6NLX4 147 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 PPIHO43447 177 aaKnown RBP12.1□□□□□ -0.47
CD48-201ENST00000368045 DLK1P80370 383 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 LRRC75BQ2VPJ9 315 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 FIP1L1Q6UN15 594 aaKnown RBP12.1□□□□□ -0.47
CD48-201ENST00000368045 Q6ZRM9 215 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 SCCPDHQ8NBX0 429 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 PINX1Q96BK5 328 aaKnown RBP12.1□□□□□ -0.47
CD48-201ENST00000368045 TMEM9BQ9NQ34 198 aa12.1□□□□□ -0.47
CD48-201ENST00000368045 CISD1Q9NZ45 108 aaKnown RBP12.1□□□□□ -0.47
CD48-201ENST00000368045 RBM7Q9Y580 266 aaKnown RBP12.1□□□□□ -0.47
CD48-201ENST00000368045 MYO15AQ9UKN7 3530 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 TRGV5A0A0B4J1U4 118 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 A0A1W2PR80 420 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 ARGFXA6NJG6 315 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 SIRPB1O00241 398 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 SMPD2O60906 423 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 ZNF806P0C7X5 589 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 RAC2P15153 192 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 EIF2S3P41091 472 aaKnown RBP12.09□□□□□ -0.47
CD48-201ENST00000368045 PPP1CBP62140 327 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 TGFBR3Q03167 851 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 PNRC1Q12796 327 aaPredicted RBP12.09□□□□□ -0.47
CD48-201ENST00000368045 PMS2P11Q13670 270 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 MSMO1Q15800 293 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 ZNF585BQ52M93 769 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 WDR86Q86TI4 376 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 DOCK10Q96BY6 2186 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 GMPPAQ96IJ6 420 aaPredicted RBP12.09□□□□□ -0.47
CD48-201ENST00000368045 LOXL4Q96JB6 756 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 CDH20Q9HBT6 801 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 KCNS2Q9ULS6 477 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 PPP1R3CQ9UQK1 317 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 MMP24Q9Y5R2 645 aa12.09□□□□□ -0.47
CD48-201ENST00000368045 IQCF6A8MYZ5 107 aa12.08□□□□□ -0.48
CD48-201ENST00000368045 H0YL77 283 aa12.08□□□□□ -0.48
CD48-201ENST00000368045 H3BP45 60 aa12.08□□□□□ -0.48
CD48-201ENST00000368045 NXPH2O95156 264 aa12.08□□□□□ -0.48
CD48-201ENST00000368045 BCL2P10415 239 aa12.08□□□□□ -0.48
CD48-201ENST00000368045 CD59P13987 128 aa12.08□□□□□ -0.48
CD48-201ENST00000368045 GLIPR1P48060 266 aa12.08□□□□□ -0.48
CD48-201ENST00000368045 OR2B8PP59922 312 aa12.08□□□□□ -0.48
CD48-201ENST00000368045 SPATA46Q5T0L3 261 aa12.08□□□□□ -0.48
CD48-201ENST00000368045 P2RX4Q99571 388 aa12.08□□□□□ -0.48
CD48-201ENST00000368045 OR51B6Q9H340 312 aa12.08□□□□□ -0.48
CD48-201ENST00000368045 LNP1A1A4G5 178 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 IFNA1P01562 189 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 UBE2NP61088 152 aaKnown RBP12.07□□□□□ -0.48
CD48-201ENST00000368045 ZNF787Q6DD87 383 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 P4HA3Q7Z4N8 544 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.07□□□□□ -0.48
CD48-201ENST00000368045 DRAM1Q8N682 238 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 TMPRSS5Q9H3S3 457 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 RPRMQ9NS64 109 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 KCNIP1Q9NZI2 227 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 IL17BQ9UHF5 180 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 COLQQ9Y215 455 aaPredicted RBP12.07□□□□□ -0.48
CD48-201ENST00000368045 TIMM9Q9Y5J7 89 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 TMEM30CPA0ZSE6 113 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 IAPPP10997 89 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 NQO2P16083 231 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 CBR1P16152 277 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 CEACAM6P40199 344 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 RPS10P46783 165 aaKnown RBP12.07□□□□□ -0.48
CD48-201ENST00000368045 CEBPGP53567 150 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 TMEM41BQ5BJD5 291 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 RBMS3Q6XE24 437 aaKnown RBP12.07□□□□□ -0.48
CD48-201ENST00000368045 LILRB2Q8N423 598 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms