RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 MND1Q9BWT6 205 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 GAL3ST2Q9H3Q3 398 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 C11orf49Q9H6J7 331 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 PSME2Q9UL46 239 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 FIS1Q9Y3D6 152 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 TRPM6Q9BX84 2022 aa0.64□□□□□ -2.31
RNU6-553P-201ENST00000364047 GNRH2O43555 120 aa0.63□□□□□ -2.31
RNU6-553P-201ENST00000364047 SLC35A2P78381 396 aa0.63□□□□□ -2.31
RNU6-553P-201ENST00000364047 ZNF90Q03938 601 aa0.63□□□□□ -2.31
RNU6-553P-201ENST00000364047 PDK2Q15119 407 aa0.63□□□□□ -2.31
RNU6-553P-201ENST00000364047 TRIP13Q15645 432 aaPredicted RBP0.63□□□□□ -2.31
RNU6-553P-201ENST00000364047 ZBTB8OSQ8IWT0 167 aa0.63□□□□□ -2.31
RNU6-553P-201ENST00000364047 ASCC1Q8N9N2 400 aaKnown RBP0.63□□□□□ -2.31
RNU6-553P-201ENST00000364047 FBN2P35556 2912 aa0.63□□□□□ -2.31
RNU6-553P-201ENST00000364047 PLCH2O75038 1416 aa0.63□□□□□ -2.31
RNU6-553P-201ENST00000364047 C9J4A7 227 aa0.62□□□□□ -2.31
RNU6-553P-201ENST00000364047 C8orf87E5RJ46 101 aa0.62□□□□□ -2.31
RNU6-553P-201ENST00000364047 BOLA2-SMG1P6H3BVE0 249 aa0.62□□□□□ -2.31
RNU6-553P-201ENST00000364047 UBFD1O14562 309 aaKnown RBP0.62□□□□□ -2.31
RNU6-553P-201ENST00000364047 SC5DO75845 299 aa0.62□□□□□ -2.31
RNU6-553P-201ENST00000364047 DNASE1L1P49184 302 aa0.62□□□□□ -2.31
RNU6-553P-201ENST00000364047 ERHP84090 104 aaKnown RBP0.62□□□□□ -2.31
RNU6-553P-201ENST00000364047 STK38Q15208 465 aa0.62□□□□□ -2.31
RNU6-553P-201ENST00000364047 TRAM1Q15629 374 aa0.62□□□□□ -2.31
RNU6-553P-201ENST00000364047 SYS1Q8N2H4 156 aa0.62□□□□□ -2.31
RNU6-553P-201ENST00000364047 XKR8Q9H6D3 395 aa0.62□□□□□ -2.31
RNU6-553P-201ENST00000364047 ANGPT4Q9Y264 503 aa0.62□□□□□ -2.31
RNU6-553P-201ENST00000364047 ALG5Q9Y673 324 aa0.62□□□□□ -2.31
RNU6-553P-201ENST00000364047 NYNRINQ9P2P1 1898 aaKnown RBP0.62□□□□□ -2.31
RNU6-553P-201ENST00000364047 GPR98Q8WXG9 6306 aa0.62□□□□□ -2.31
RNU6-553P-201ENST00000364047 TNIKQ9UKE5 1360 aa0.61□□□□□ -2.31
RNU6-553P-201ENST00000364047 IGKV3D-7A0A0C4DH55 119 aa0.61□□□□□ -2.31
RNU6-553P-201ENST00000364047 IGKV3OR2-268A0A0C4DH90 116 aa0.61□□□□□ -2.31
RNU6-553P-201ENST00000364047 E7EWF7 191 aa0.61□□□□□ -2.31
RNU6-553P-201ENST00000364047 EPPINO95925 133 aa0.61□□□□□ -2.31
RNU6-553P-201ENST00000364047 ESDP10768 282 aa0.61□□□□□ -2.31
RNU6-553P-201ENST00000364047 AKR1C4P17516 323 aa0.61□□□□□ -2.31
RNU6-553P-201ENST00000364047 BGNP21810 368 aa0.61□□□□□ -2.31
RNU6-553P-201ENST00000364047 RPA3P35244 121 aaPredicted RBP0.61□□□□□ -2.31
RNU6-553P-201ENST00000364047 RPL14P50914 215 aaKnown RBP0.61□□□□□ -2.31
RNU6-553P-201ENST00000364047 PID1Q7Z2X4 250 aa0.61□□□□□ -2.31
RNU6-553P-201ENST00000364047 OR11L1Q8NGX0 322 aa0.61□□□□□ -2.31
RNU6-553P-201ENST00000364047 TBX5Q99593 518 aa0.61□□□□□ -2.31
RNU6-553P-201ENST00000364047 DDX18Q9NVP1 670 aaKnown RBP0.61□□□□□ -2.31
RNU6-553P-201ENST00000364047 GOLGA6L7A0A1B0GV03 622 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 TMEM235A6NFC5 223 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 ZNF705FA8MVS1 300 aaPredicted RBP0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 C2orf74A8MZ97 194 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 H3BSA7 217 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 VAPBO95292 243 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 CTSEP14091 401 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 ATP5J2P56134 94 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 TSPEAR-AS2P59090 65 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 C1QTNF8P60827 252 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 PSG3Q16557 428 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 C6orf183Q5T699 404 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 LRRC28Q86X40 367 aaPredicted RBP0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 OR5D18Q8NGL1 313 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 OR13C9Q8NGT0 318 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 FGF13Q92913 245 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 PGLYRP3Q96LB9 341 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 C11orf1Q9H5F2 150 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 RMND1Q9NWS8 449 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 STMN3Q9NZ72 180 aa0.6□□□□□ -2.31
RNU6-553P-201ENST00000364047 YLPM1P49750 1951 aaKnown RBP0.59□□□□□ -2.31
RNU6-553P-201ENST00000364047 CCDC88CQ9P219 2028 aa0.59□□□□□ -2.31
RNU6-553P-201ENST00000364047 hCG_2039718K7EN88 272 aa0.59□□□□□ -2.31
RNU6-553P-201ENST00000364047 SHOX2O60902 331 aaPredicted RBP0.59□□□□□ -2.31
RNU6-553P-201ENST00000364047 SLC38A11Q08AI6 406 aa0.59□□□□□ -2.31
RNU6-553P-201ENST00000364047 PAFAH1B3Q15102 231 aaKnown RBP0.59□□□□□ -2.31
RNU6-553P-201ENST00000364047 ZNF791Q3KP31 576 aaPredicted RBP0.59□□□□□ -2.31
RNU6-553P-201ENST00000364047 CAVIN4Q5BKX8 364 aa0.59□□□□□ -2.31
RNU6-553P-201ENST00000364047 HENMT1Q5T8I9 393 aaKnown RBP0.59□□□□□ -2.31
RNU6-553P-201ENST00000364047 OR8B12Q8NGG6 310 aa0.59□□□□□ -2.31
RNU6-553P-201ENST00000364047 LGALS14Q8TCE9 139 aa0.59□□□□□ -2.31
RNU6-553P-201ENST00000364047 METTL17Q9H7H0 456 aaPredicted RBP0.59□□□□□ -2.31
RNU6-553P-201ENST00000364047 RPRD1BQ9NQG5 326 aaKnown RBP0.59□□□□□ -2.31
RNU6-553P-201ENST00000364047 TAS2R13Q9NYV9 303 aa0.59□□□□□ -2.31
RNU6-553P-201ENST00000364047 CLUHO75153 1309 aa0.59□□□□□ -2.32
RNU6-553P-201ENST00000364047 ZNF532Q9HCE3 1301 aa0.59□□□□□ -2.32
RNU6-553P-201ENST00000364047 KDM5BQ9UGL1 1544 aa0.59□□□□□ -2.32
RNU6-553P-201ENST00000364047 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.32
RNU6-553P-201ENST00000364047 IGKV3-7A0A075B6H7 116 aa0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 TMSB15BA0A087X1C1 80 aa0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 TRAV41A0A0B4J266 112 aa0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 GRIFINA4D1Z8 144 aa0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 MGAT4DA6NG13 374 aa0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 CDIPTO14735 213 aa0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 CDK14O94921 469 aa0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 CRYGCP07315 174 aa0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 STAG3L2P0CL84 134 aa0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 ATF1P18846 271 aa0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 IDH3GP51553 393 aaPredicted RBP0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 CTAG1AP78358 180 aa0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 HSP90B2PQ58FF3 399 aa0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 UNQ6190/PRO20217Q6UXQ8 127 aa0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 PDCL2Q8N4E4 241 aa0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 ACBD4Q8NC06 268 aa0.58□□□□□ -2.32
RNU6-553P-201ENST00000364047 ANGPTL6Q8NI99 470 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms