RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 HEY1Q9Y5J3 304 aa1.55□□□□□ -2.16
RNU6-560P-201ENST00000364007 NUP153P49790 1475 aaKnown RBP1.55□□□□□ -2.16
RNU6-560P-201ENST00000364007 NAV1Q8NEY1 1877 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 PTPRBP23467 1997 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 A0A0J9YX75 114 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 DENRO43583 198 aaKnown RBP1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 TRAPPC3O43617 180 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 SOD1P00441 154 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 LIMS3P0CW19 117 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 LIMS4P0CW20 117 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 CTSEP14091 401 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 CD99P14209 185 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 ZNF7P17097 686 aaPredicted RBP1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 RCVRNP35243 200 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 ZNF140P52738 457 aaPredicted RBP1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 SS18Q15532 418 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 HENMT1Q5T8I9 393 aaKnown RBP1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 COPS6Q7L5N1 327 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 ZBTB8OSQ8IWT0 167 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 ANGPTL6Q8NI99 470 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 GTF2H4Q92759 462 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 TXNDC17Q9BRA2 123 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 TTTY12Q9BZ98 90 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 MINOS1-NBL1R4GNA1 71 aa1.54□□□□□ -2.16
RNU6-560P-201ENST00000364007 ZNF879B4DU55 563 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 OR4A8P0C604 315 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 NQO2P16083 231 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 GABRA4P48169 554 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 PSMD7P51665 324 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 HADHBP55084 474 aaKnown RBP1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 PTPRJQ12913 1337 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 OR4D1Q15615 310 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 XKRXQ6PP77 449 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 ZNF767PQ75MW2 155 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 DOLPP1Q86YN1 238 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 RORBQ92753 470 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 C19orf60Q96EN9 201 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 FAM210AQ96ND0 272 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 CYTH2Q99418 400 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 ZNF251Q9BRH9 671 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 C16orf95Q9H693 158 aa1.53□□□□□ -2.16
RNU6-560P-201ENST00000364007 KNCNA6PVL3 124 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 ORM2P19652 201 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 GADD45AP24522 165 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 SPAM1P38567 509 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 PDK2Q15119 407 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 TMEM249Q2WGJ8 235 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 TRMT12Q53H54 448 aaKnown RBP1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 CENPWQ5EE01 88 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 MTERF4Q7Z6M4 381 aaKnown RBP1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 OR4P4Q8NGL7 312 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 ERMNQ8TAM6 284 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 RNASEH2CQ8TDP1 164 aaKnown RBP1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 TMEM56Q96MV1 263 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 UPK3BQ9BT76 320 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 SLC19A3Q9BZV2 496 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 CHST5Q9GZS9 411 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 FAM206AQ9NX38 181 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 COMMD9Q9P000 198 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 FBXL3Q9UKT7 428 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 SCML1Q9UN30 329 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 NUMA1Q14980 2115 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 WDR90Q96KV7 1748 aa1.52□□□□□ -2.17
RNU6-560P-201ENST00000364007 FNDC10F2Z333 226 aa1.51□□□□□ -2.17
RNU6-560P-201ENST00000364007 LY6LH3BQJ8 138 aa1.51□□□□□ -2.17
RNU6-560P-201ENST00000364007 MPZL2O60487 215 aa1.51□□□□□ -2.17
RNU6-560P-201ENST00000364007 FBP1P09467 338 aa1.51□□□□□ -2.17
RNU6-560P-201ENST00000364007 PPP1CCP36873 323 aaKnown RBP1.51□□□□□ -2.17
RNU6-560P-201ENST00000364007 ZNF117Q03924 483 aa1.51□□□□□ -2.17
RNU6-560P-201ENST00000364007 MAPK14Q16539 360 aa1.51□□□□□ -2.17
RNU6-560P-201ENST00000364007 TIMM23BQ5SRD1 257 aa1.51□□□□□ -2.17
RNU6-560P-201ENST00000364007 TAMM41Q96BW9 452 aa1.51□□□□□ -2.17
RNU6-560P-201ENST00000364007 DNAJC30Q96LL9 226 aa1.51□□□□□ -2.17
RNU6-560P-201ENST00000364007 HBEGFQ99075 208 aa1.51□□□□□ -2.17
RNU6-560P-201ENST00000364007 GTSF1LQ9H1H1 148 aa1.51□□□□□ -2.17
RNU6-560P-201ENST00000364007 CXCL16Q9H2A7 254 aa1.51□□□□□ -2.17
RNU6-560P-201ENST00000364007 MRPS16Q9Y3D3 137 aaKnown RBP1.51□□□□□ -2.17
RNU6-560P-201ENST00000364007 USP42Q9H9J4 1324 aaKnown RBP1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 A0A1W2PQL4 384 aaPredicted RBP1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 C19orf71A6NCJ1 209 aa1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 ERICH4A6NGS2 130 aa1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 S1PR2O95136 353 aa1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 ASS1P00966 412 aaKnown RBP1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 NQO1P15559 274 aaKnown RBP1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 PSMB3P49720 205 aa1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 RWDD2BP57060 319 aa1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 ACTBP60709 375 aa1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 ACTG1P63261 375 aa1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 FAM3AP98173 230 aa1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 SYCP1Q15431 976 aa1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 MRPL51Q4U2R6 128 aaKnown RBP1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 TTC33Q6PID6 262 aaPredicted RBP1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 TCAIMQ8N3R3 496 aa1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 TMEM75Q8N9X5 138 aa1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 MED18Q9BUE0 208 aa1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 SMDT1Q9H4I9 107 aa1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 MYH11P35749 1972 aa1.5□□□□□ -2.17
RNU6-560P-201ENST00000364007 OTOGLQ3ZCN5 2332 aa1.49□□□□□ -2.17
RNU6-560P-201ENST00000364007 CLUHO75153 1309 aa1.49□□□□□ -2.17
RNU6-560P-201ENST00000364007 PHYHO14832 338 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms