RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 COTL1Q14019 142 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 TAF9Q16594 264 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 PYDC2Q56P42 97 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 EBLN2Q6P2I7 272 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 HS3ST5Q8IZT8 346 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 YIPF7Q8N8F6 280 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 LY6G5BQ8NDX9 201 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 TNFAIP8L1Q8WVP5 186 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 HIST1H2BAQ96A08 127 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 YLPM1P49750 1951 aaKnown RBP1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 NUP205Q92621 2012 aa1.84□□□□□ -2.12
RNU6-28P-201ENST00000362378 NACADO15069 1562 aa1.84□□□□□ -2.12
RNU6-28P-201ENST00000362378 CEP170Q5SW79 1584 aa1.84□□□□□ -2.12
RNU6-28P-201ENST00000362378 MYO5BQ9ULV0 1848 aa1.84□□□□□ -2.12
RNU6-28P-201ENST00000362378 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.12
RNU6-28P-201ENST00000362378 IGKV3D-11A0A0A0MRZ8 115 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 B4DEV8 164 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 F5H5T6 163 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 CFL1P23528 166 aaKnown RBP1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 PSMA1P25786 263 aaKnown RBP1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 ADORA1P30542 326 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 PSMB3P49720 205 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 SULT1A2P50226 295 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 GABARAPL2P60520 117 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 MGAT3Q09327 533 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 MED21Q13503 144 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 C1DQ13901 141 aaKnown RBP1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 OR8G1Q15617 311 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 HLA-DRB5Q30154 266 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 TRMT12Q53H54 448 aaKnown RBP1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 DNM1P34Q6PK57 102 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 SCGB1D4Q6XE38 83 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 Q6ZRU5 148 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 KRTAP5-5Q701N2 237 aaPredicted RBP1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 FAM19A5Q7Z5A7 132 aaPredicted RBP1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 RIBC1Q8N443 379 aaPredicted RBP1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 OR51H1Q8NH63 302 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 SUN5Q8TC36 379 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 CD200R1Q8TD46 325 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 OR5P3Q8WZ94 311 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 RAD51AP1Q96B01 352 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 PPCDCQ96CD2 204 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 TMEM208Q9BTX3 173 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 SLC22A4Q9H015 551 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 SPANXB1Q9NS25 103 aaPredicted RBP1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 PLEKHJ1Q9NW61 149 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 LINC00527Q9UJ94 153 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 OR51B4Q9Y5P0 310 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 LTBP4Q8N2S1 1624 aa1.83□□□□□ -2.12
RNU6-28P-201ENST00000362378 A0A0A6YYH2 397 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 A6NJ64 397 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 METTL15A6NJ78 407 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 GOLGA8KD6RF30 607 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 GOLGA8MH3BSY2 632 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 EEF1E1O43324 174 aaKnown RBP1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 COCHO43405 550 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 ARL6IP5O75915 188 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 CDS2O95674 445 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 IGKV4-1P06312 121 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 CD99P14209 185 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 GABRA3P34903 492 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 H2BFSP57053 126 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 DAD1P61803 113 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 DNAL1Q4LDG9 190 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 SPATA31B1PQ5VZV4 182 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 DOLPP1Q86YN1 238 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 PLCZ1Q86YW0 608 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 TMEM251Q8N6I4 163 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 ZFAND2AQ8N6M9 145 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 TMEM75Q8N9X5 138 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 MUC7Q8TAX7 377 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 EBNA1BP2Q99848 306 aaKnown RBP1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 HIGD2AQ9BW72 106 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 GNB1LQ9BYB4 327 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 GLS2Q9UI32 602 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 MCTS1Q9ULC4 181 aaKnown RBP1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 SNX10Q9Y5X0 201 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 PRR14LQ5THK1 2151 aa1.82□□□□□ -2.12
RNU6-28P-201ENST00000362378 TINCRA0A1B0GVN0 87 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 K7EQS6 105 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 BIRC5O15392 142 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 ZW10O43264 779 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 SLC25A20O43772 301 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 OR12D1P0DN82 309 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 LGALS3P17931 250 aaKnown RBP1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 MIPP30301 263 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 COILP38432 576 aaPredicted RBP1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 CD79BP40259 229 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 SMAGPQ0VAQ4 97 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 PDGFRLQ15198 375 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 MAPK14Q16539 360 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 HSP90B2PQ58FF3 399 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 HCP5Q6MZN7 132 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 FAM151BQ6UXP7 276 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 TCF24Q7RTU0 167 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 SCXQ7RTU7 201 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 SMIM19Q96E16 107 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 NKIRAS1Q9NYS0 192 aa1.81□□□□□ -2.12
RNU6-28P-201ENST00000362378 NPATQ14207 1427 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms