RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 OR4P4Q8NGL7 312 aa16.05■□□□□ 0.16
CLIP2-202ENST00000361545 ATP5SQ99766 215 aa16.05■□□□□ 0.16
CLIP2-202ENST00000361545 NUDT16L1Q9BRJ7 211 aaKnown RBP16.05■□□□□ 0.16
CLIP2-202ENST00000361545 PARP11Q9NR21 331 aa16.05■□□□□ 0.16
CLIP2-202ENST00000361545 HPXP02790 462 aa16.05■□□□□ 0.16
CLIP2-202ENST00000361545 HOXB1P14653 301 aaPredicted RBP16.05■□□□□ 0.16
CLIP2-202ENST00000361545 FAM27E3Q08E93 113 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 OR4X1Q8NH49 305 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 OR51B2Q9Y5P1 312 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 ARL2-SNX15V9GYD0 113 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 NPY1RP25929 384 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 PSG5Q15238 335 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 RNF212Q495C1 297 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 NFAM1Q8NET5 270 aaPredicted RBP16.04■□□□□ 0.16
CLIP2-202ENST00000361545 MARS2Q96GW9 593 aaKnown RBP16.04■□□□□ 0.16
CLIP2-202ENST00000361545 WNT5BQ9H1J7 359 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 TECRQ9NZ01 308 aaKnown RBP16.04■□□□□ 0.16
CLIP2-202ENST00000361545 TMEM50BP56557 158 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 VWA1Q6PCB0 445 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 C11orf42Q8N5U0 333 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 P2RX4Q99571 388 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 PIMREGQ9BSJ6 248 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 ZFC3H1O60293 1989 aaKnown RBP16.04■□□□□ 0.16
CLIP2-202ENST00000361545 TRAV20A0A0B4J274 112 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 RAMP1O60894 148 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 KLF9Q13886 244 aaPredicted RBP16.04■□□□□ 0.16
CLIP2-202ENST00000361545 COMMD1Q8N668 190 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 OR4D10Q8NGI6 311 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 ZNF586Q9NXT0 402 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 KCNK7Q9Y2U2 307 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 RAXQ9Y2V3 346 aa16.04■□□□□ 0.16
CLIP2-202ENST00000361545 TGFBR3LH3BV60 316 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 SCTP09683 121 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 EGR4Q05215 589 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 TMEM241Q24JQ0 296 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 MMP26Q9NRE1 261 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 RCC2Q9P258 522 aaKnown RBP16.03■□□□□ 0.16
CLIP2-202ENST00000361545 A0A0G2JMM0 328 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 LOC102723971A0A1B0GUV8 181 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 A0A1W2PPB8 328 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 A0A1W2PRS3 328 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 KIR3DP1A8MWS1 328 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 GAPDHP04406 335 aaKnown RBP16.03■□□□□ 0.16
CLIP2-202ENST00000361545 CXCL3P19876 107 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 CEBPEQ15744 281 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 FAM222BQ8WU58 562 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 CPN1P15169 458 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 MUC15Q8N387 334 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 LINC00052Q96N35 136 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 SIRT7Q9NRC8 400 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 LTBP1Q14766 1721 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 ZNF716A6NP11 495 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 ARF6P62330 175 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 CD300CQ08708 224 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 FA2HQ7L5A8 372 aa16.03■□□□□ 0.16
CLIP2-202ENST00000361545 CDRT15L2A8MXV6 281 aa16.02■□□□□ 0.16
CLIP2-202ENST00000361545 GFRA1P56159 465 aa16.02■□□□□ 0.16
CLIP2-202ENST00000361545 VSIG4Q9Y279 399 aa16.02■□□□□ 0.16
CLIP2-202ENST00000361545 FSTP19883 344 aa16.02■□□□□ 0.16
CLIP2-202ENST00000361545 SNX22Q96L94 193 aa16.02■□□□□ 0.16
CLIP2-202ENST00000361545 ZNF107Q9UII5 783 aaPredicted RBP16.02■□□□□ 0.16
CLIP2-202ENST00000361545 CBY1Q9Y3M2 126 aa16.02■□□□□ 0.16
CLIP2-202ENST00000361545 RTTNQ86VV8 2226 aa16.02■□□□□ 0.16
CLIP2-202ENST00000361545 GATCO43716 136 aaKnown RBP16.02■□□□□ 0.15
CLIP2-202ENST00000361545 MOGAT2Q3SYC2 334 aa16.02■□□□□ 0.15
CLIP2-202ENST00000361545 TPPP2P59282 170 aa16.02■□□□□ 0.15
CLIP2-202ENST00000361545 GUCD1Q96NT3 240 aa16.02■□□□□ 0.15
CLIP2-202ENST00000361545 LPAR5Q9H1C0 372 aa16.02■□□□□ 0.15
CLIP2-202ENST00000361545 HSBP1O75506 76 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 Q6ZT83 130 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 RNF2Q99496 336 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 LOC285556D6RIA3 1793 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 IGKV3D-11A0A0A0MRZ8 115 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 SYNGR3O43761 229 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 PTX4Q96A99 478 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 CCL19Q99731 98 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 FAM206AQ9NX38 181 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 NAT8BQ9UHF3 227 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 OR1L1Q8NH94 360 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 A0A1B0GU03 582 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 FAM106CPP0CH98 169 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 CSRP3P50461 194 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 LOXL3P58215 753 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 ACSF3Q4G176 576 aaPredicted RBP16.01■□□□□ 0.15
CLIP2-202ENST00000361545 FAM162BQ5T6X4 162 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 SLC24A4Q8NFF2 622 aa16.01■□□□□ 0.15
CLIP2-202ENST00000361545 TNFSF10P50591 281 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 C10orf113Q5VZT2 155 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 TMEM167BQ9NRX6 74 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 TRAPPC1Q9Y5R8 145 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 PPIAL4CA0A0B4J2A2 164 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 TRBV5-5A0A0J9YX44 114 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 PLA2G10O15496 165 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 HPRT1P00492 218 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 PPIAL4GP0DN37 164 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 PF4V1P10720 104 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 SULT1A1P50225 295 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 EWSR1Q01844 656 aaKnown RBP eCLIP16■□□□□ 0.15
CLIP2-202ENST00000361545 GCSAMQ8N6F7 178 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 CDS2O95674 445 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms