RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 ACBD7Q8N6N7 88 aa10.66□□□□□ -0.7
VPS29-201ENST00000360579 OR52N1Q8NH53 320 aa10.66□□□□□ -0.7
VPS29-201ENST00000360579 CT45A3Q8NHU0 189 aa10.66□□□□□ -0.7
VPS29-201ENST00000360579 UBALD1Q8TB05 177 aa10.66□□□□□ -0.7
VPS29-201ENST00000360579 NEK7Q8TDX7 302 aa10.66□□□□□ -0.7
VPS29-201ENST00000360579 TSEN15Q8WW01 171 aaKnown RBP10.66□□□□□ -0.7
VPS29-201ENST00000360579 TRUB1Q8WWH5 349 aaKnown RBP10.66□□□□□ -0.7
VPS29-201ENST00000360579 C4orf36Q96KX1 117 aa10.66□□□□□ -0.7
VPS29-201ENST00000360579 CIB1Q99828 191 aa10.66□□□□□ -0.7
VPS29-201ENST00000360579 METTL9Q9H1A3 318 aa10.66□□□□□ -0.7
VPS29-201ENST00000360579 TPSG1Q9NRR2 321 aa10.66□□□□□ -0.7
VPS29-201ENST00000360579 PAK1IP1Q9NWT1 392 aaPredicted RBP10.66□□□□□ -0.7
VPS29-201ENST00000360579 IL36GQ9NZH8 169 aa10.66□□□□□ -0.7
VPS29-201ENST00000360579 KIAA1456Q9P272 454 aa10.66□□□□□ -0.7
VPS29-201ENST00000360579 FOXA2Q9Y261 457 aaPredicted RBP10.66□□□□□ -0.7
VPS29-201ENST00000360579 IGHV4OR15-8A0A075B7B6 117 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 A0A087WW49 117 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 A0A1W2PN81 502 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 IGLV1-51P01701 117 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 MT-ND4P03905 459 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 ARSBP15848 533 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 CHRNA7P36544 502 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 ZNF134P52741 427 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 MRPL28Q13084 256 aaKnown RBP10.65□□□□□ -0.7
VPS29-201ENST00000360579 ATP6AP1Q15904 470 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 ECSCRQ19T08 205 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 C5orf64Q2M2E5 130 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 DNAL1Q4LDG9 190 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 ATAD3CQ5T2N8 411 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 C6orf183Q5T699 404 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 ZNF529Q6P280 563 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 TRAT1Q6PIZ9 186 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 S100A13Q99584 98 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 JAM3Q9BX67 310 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 GABARAPL3Q9BY60 117 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 ANKRD60Q9BZ19 345 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 SPACA1Q9HBV2 294 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 POMPQ9Y244 141 aa10.65□□□□□ -0.7
VPS29-201ENST00000360579 SNTNA6NMZ2 147 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 C12orf77C9JDV5 145 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 GEMIN2O14893 280 aaKnown RBP10.64□□□□□ -0.71
VPS29-201ENST00000360579 ZNF780AO75290 641 aaPredicted RBP10.64□□□□□ -0.71
VPS29-201ENST00000360579 CD40LGP29965 261 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 CRIP2P52943 208 aaPredicted RBP10.64□□□□□ -0.71
VPS29-201ENST00000360579 TMEM267Q0VDI3 215 aaPredicted RBP10.64□□□□□ -0.71
VPS29-201ENST00000360579 HAGHQ16775 308 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 ZNF660Q6AZW8 331 aaPredicted RBP10.64□□□□□ -0.71
VPS29-201ENST00000360579 SYS1Q8N2H4 156 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 NPBQ8NG41 125 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 OR10V1Q8NGI7 309 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 OR5AK2Q8NH90 309 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 RSRP1Q9BUV0 290 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 KRTAP17-1Q9BYP8 105 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 IMPAD1Q9NX62 359 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 PGPEP1Q9NXJ5 209 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 ZNF581Q9P0T4 197 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 TRAPPC2LQ9UL33 140 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 RNF150Q9ULK6 438 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 ING4Q9UNL4 249 aa10.64□□□□□ -0.71
VPS29-201ENST00000360579 H0Y980 276 aa10.63□□□□□ -0.71
VPS29-201ENST00000360579 GYG2O15488 501 aa10.63□□□□□ -0.71
VPS29-201ENST00000360579 ATP8B1O43520 1251 aa10.63□□□□□ -0.71
VPS29-201ENST00000360579 CDRT1O95170 752 aa10.63□□□□□ -0.71
VPS29-201ENST00000360579 CD2P06729 351 aa10.63□□□□□ -0.71
VPS29-201ENST00000360579 FASP25445 335 aa10.63□□□□□ -0.71
VPS29-201ENST00000360579 POLR2IP36954 125 aaKnown RBP10.63□□□□□ -0.71
VPS29-201ENST00000360579 GYS2P54840 703 aa10.63□□□□□ -0.71
VPS29-201ENST00000360579 RAB40BQ12829 278 aa10.63□□□□□ -0.71
VPS29-201ENST00000360579 C19orf54Q5BKX5 351 aa10.63□□□□□ -0.71
VPS29-201ENST00000360579 SLC25A30Q5SVS4 291 aa10.63□□□□□ -0.71
VPS29-201ENST00000360579 SYT6Q5T7P8 510 aaPredicted RBP10.63□□□□□ -0.71
VPS29-201ENST00000360579 MEDAGQ5VYS4 303 aa10.63□□□□□ -0.71
VPS29-201ENST00000360579 OR51A2Q8NGJ7 313 aa10.63□□□□□ -0.71
VPS29-201ENST00000360579 RBMXL1Q96E39 390 aaKnown RBP10.63□□□□□ -0.71
VPS29-201ENST00000360579 TUBA4BQ9H853 241 aa10.63□□□□□ -0.71
VPS29-201ENST00000360579 MCRIP1C9JLW8 97 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 SOX15O60248 233 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 NDUFA3O95167 84 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 HBZP02008 142 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 GTF2F2P13984 249 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 SERPINA2P20848 420 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 CNTFRP26992 372 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 ZNF93P35789 620 aaPredicted RBP10.62□□□□□ -0.71
VPS29-201ENST00000360579 CD200R1LQ6Q8B3 271 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 GTSCR1Q86UQ5 136 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 PRR18Q8N4B5 295 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 CCDC197Q8NCU1 140 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 RITA1Q96K30 269 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 PDCD1LG2Q9BQ51 273 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 ABHD14AQ9BUJ0 271 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 ALG8Q9BVK2 526 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 SLA2Q9H6Q3 261 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 OR2S2Q9NQN1 319 aa10.62□□□□□ -0.71
VPS29-201ENST00000360579 CA11O75493 328 aa10.61□□□□□ -0.71
VPS29-201ENST00000360579 IGHV3-11P01762 117 aa10.61□□□□□ -0.71
VPS29-201ENST00000360579 ZP3P21754 424 aa10.61□□□□□ -0.71
VPS29-201ENST00000360579 PPP3R1P63098 170 aa10.61□□□□□ -0.71
VPS29-201ENST00000360579 GPR176Q14439 515 aa10.61□□□□□ -0.71
VPS29-201ENST00000360579 MORN2Q502X0 79 aa10.61□□□□□ -0.71
VPS29-201ENST00000360579 HAPLN4Q86UW8 402 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms