RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 FFAR1O14842 300 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 WBP4O75554 376 aaKnown RBP5.16□□□□□ -1.58
CCDC196-201ENST00000359454 FCN3O75636 299 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 NDUFB2O95178 105 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 LHBP01229 141 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 APOC3P02656 99 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 GRPP07492 148 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 DUX4L2P0CJ85 424 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 DUX4L3P0CJ86 424 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 DUX4L4P0CJ87 422 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 DUX4L5P0CJ88 424 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 DUX4L6P0CJ89 424 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 DUX4L7P0CJ90 424 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 PSMA1P25786 263 aaKnown RBP5.16□□□□□ -1.58
CCDC196-201ENST00000359454 GRK5P34947 590 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 MAP2K4P45985 399 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 CDK5Q00535 292 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 ST3GAL4Q11206 333 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 RAB40BQ12829 278 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 IRF3Q14653 427 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 RBMS2Q15434 407 aaKnown RBP5.16□□□□□ -1.58
CCDC196-201ENST00000359454 RSPO1Q2MKA7 263 aaPredicted RBP5.16□□□□□ -1.58
CCDC196-201ENST00000359454 C19orf54Q5BKX5 351 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 FAM74A1Q5RGS3 127 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 TEX36Q5VZQ5 186 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 NCR3LG1Q68D85 454 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 OR8G2PQ6IF36 304 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 PGBD2Q6P3X8 592 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 SLC36A1Q7Z2H8 476 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 NAA40Q86UY6 237 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 FAM90A1Q86YD7 464 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 MS4A15Q8N5U1 240 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 GCSAMQ8N6F7 178 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 KLHDC1Q8N7A1 406 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 C11orf44Q8N8P7 122 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 OR52L1Q8NGH7 329 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 OR2T6Q8NHC8 308 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 RNASE8Q8TDE3 154 aaKnown RBP5.16□□□□□ -1.58
CCDC196-201ENST00000359454 GGHQ92820 318 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 CREB3L1Q96BA8 519 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 GPX7Q96SL4 187 aaPredicted RBP5.16□□□□□ -1.58
CCDC196-201ENST00000359454 NIPSNAP1Q9BPW8 284 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 FAM234AQ9H0X4 552 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 FN3KQ9H479 309 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 RAB18Q9NP72 206 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 NRIP3Q9NQ35 241 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 MRPL15Q9P015 296 aaKnown RBP5.16□□□□□ -1.58
CCDC196-201ENST00000359454 RHCGQ9UBD6 479 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 DUX4Q9UBX2 424 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 OR52A1Q9UKL2 312 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 FOXJ3Q9UPW0 622 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 SIGLEC9Q9Y336 463 aa5.16□□□□□ -1.58
CCDC196-201ENST00000359454 EXOSC1Q9Y3B2 195 aaKnown RBP5.16□□□□□ -1.58
CCDC196-201ENST00000359454 PLXNB1O43157 2135 aa5.15□□□□□ -1.58
CCDC196-201ENST00000359454 IGHV3OR15-7A0A075B7D8 119 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 TRBV4-1A0A0J9YWV2 114 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 A0A1W2PRD5 423 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 A0A1W2PRF3 423 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 A0A1W2PRM7 423 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 H3BUX3 64 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 J3KTA2 159 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 IMPA2O14732 288 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 MYL12BO14950 172 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 NDUFB3O43676 98 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 PPP1R3DO95685 299 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 FADS2O95864 444 aaKnown RBP5.15□□□□□ -1.59
CCDC196-201ENST00000359454 IFNA17P01571 189 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 HTR1AP08908 422 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 GYPEP15421 78 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 MYL12AP19105 171 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 PSMB9P28065 219 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 SLC6A1P30531 599 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 SAA4P35542 130 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 CDKN2AP42771 156 aaKnown RBP5.15□□□□□ -1.59
CCDC196-201ENST00000359454 UBE2E1P51965 193 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 FGF8P55075 233 aaPredicted RBP5.15□□□□□ -1.59
CCDC196-201ENST00000359454 RRAS2P62070 204 aaPredicted RBP5.15□□□□□ -1.59
CCDC196-201ENST00000359454 FABP9Q0Z7S8 132 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 MEP1BQ16820 701 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 C5orf64Q2M2E5 130 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 NSUN5P1Q3KNT7 163 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 LRRC10Q5BKY1 277 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 TMEM236Q5W0B7 351 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 LEMD1Q68G75 181 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 LAIR2Q6ISS4 152 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 SLC18B1Q6NT16 456 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 PLET1Q6UQ28 207 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 DPY19L2P2Q6ZN68 376 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 ZNF826PQ6ZT77 177 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 AHSA2Q719I0 299 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 CCDC190Q86UF4 302 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 CPOQ8IVL8 374 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 Q8N7P7 452 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 BPIFCQ8NFQ6 507 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 OR4F17Q8NGA8 305 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 OR9Q2Q8NGE9 314 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 OR2AJ1Q8NGZ0 328 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 OR2T4Q8NH00 348 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 C8orf46Q8TAG6 207 aa5.15□□□□□ -1.59
CCDC196-201ENST00000359454 PPP1R35Q8TAP8 253 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 232.8 ms