RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 UBE2MP61081 183 aaKnown RBP7.64□□□□□ -1.19
UPF2-202ENST00000357604 CDSNQ15517 529 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 TRANK1O15050 2925 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 IGHV2-26A0A0B4J1V2 119 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 A8MXK9 166 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 YPEL1O60688 119 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 FCGR3BO75015 233 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 LY6HO94772 140 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 OR8U9P0C7N5 309 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 SSX2Q16385 188 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 BRICD5Q6PL45 260 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 OR8U1Q8NH10 309 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 THAP6Q8TBB0 222 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 CIB3Q96Q77 187 aaPredicted RBP7.63□□□□□ -1.19
UPF2-202ENST00000357604 YPEL2Q96QA6 119 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 IGKV1D-17A0A075B6S4 117 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 CLEC18AA5D8T8 446 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 M0QYG6 137 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 IGHV4-31P0DP07 118 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 PPP1CCP36873 323 aaKnown RBP7.63□□□□□ -1.19
UPF2-202ENST00000357604 LYPD2Q6UXB3 125 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 CLEC18BQ6UXF7 455 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 HEPN1Q6WQI6 88 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 CLEC18CQ8NCF0 446 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 SMIM4Q8WVI0 70 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 SULT4A1Q9BR01 284 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 PRNDQ9UKY0 176 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 MOB4Q9Y3A3 225 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 PIN1P1O15428 100 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 LHBP01229 141 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 OPN1MWP04001 364 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 SNRNP70P08621 437 aaKnown RBP7.63□□□□□ -1.19
UPF2-202ENST00000357604 OPN1MW2P0DN77 364 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 OPN1MW3P0DN78 364 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 BEND2Q8NDZ0 799 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 SLC25A33Q9BSK2 321 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 IGKV1-9A0A0C4DH69 117 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 J3QR06 171 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 DYRK1AQ13627 763 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 CENPVQ7Z7K6 275 aaPredicted RBP7.63□□□□□ -1.19
UPF2-202ENST00000357604 TPRX1Q8N7U7 411 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 OR52I2Q8NH67 350 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 MAFIPQ8WZ33 124 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 CORO2AQ92828 525 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 RNF5Q99942 180 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 PLEKHA3Q9HB20 300 aa7.63□□□□□ -1.19
UPF2-202ENST00000357604 CACNA1BQ00975 2339 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 HPRT1P00492 218 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 OR8U8P0C7N1 319 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 PHLDA2Q53GA4 152 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 OR5H6Q8NGV6 325 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 OR1L1Q8NH94 360 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 ABHD14BQ96IU4 210 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 SLC25A31Q9H0C2 315 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 POMT1Q9Y6A1 747 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 TNXAQ16473 311 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 TPTE2P1Q5T6R2 138 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 ZDHHC22Q8N966 263 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 OR13A1Q8NGR1 328 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 DYNC2LI1Q8TCX1 351 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 TMEM68Q96MH6 324 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 FYTTD1Q96QD9 318 aaKnown RBP7.62□□□□□ -1.19
UPF2-202ENST00000357604 PPIL3Q9H2H8 161 aaKnown RBP7.62□□□□□ -1.19
UPF2-202ENST00000357604 RNF167Q9H6Y7 350 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 ZNF230Q9UIE0 474 aaPredicted RBP7.62□□□□□ -1.19
UPF2-202ENST00000357604 AHCTF1Q8WYP5 2266 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 SMCO3A2RU48 225 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 RP2O75695 350 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 MRPL30Q8TCC3 161 aaKnown RBP7.62□□□□□ -1.19
UPF2-202ENST00000357604 HARBI1Q96MB7 349 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 SEC16AO15027 2179 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 SIAH2O43255 324 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 PFDN1O60925 122 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 NFYAP23511 347 aaPredicted RBP7.62□□□□□ -1.19
UPF2-202ENST00000357604 RPS11P62280 158 aaKnown RBP eCLIP7.62□□□□□ -1.19
UPF2-202ENST00000357604 FAM76BQ5HYJ3 339 aa7.62□□□□□ -1.19
UPF2-202ENST00000357604 NAA50Q9GZZ1 169 aaKnown RBP7.62□□□□□ -1.19
UPF2-202ENST00000357604 GVINP1Q7Z2Y8 2422 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 TRBV6-6A0A0A6YYG2 114 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 LANCL1O43813 399 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 IFNA5P01569 189 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 HIST1H1BP16401 226 aaKnown RBP7.61□□□□□ -1.19
UPF2-202ENST00000357604 COA4Q9NYJ1 87 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 GSKIPQ9P0R6 139 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 METTL1Q9UBP6 276 aaKnown RBP7.61□□□□□ -1.19
UPF2-202ENST00000357604 LMO1P25800 156 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 LPAR6P43657 344 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 AP2S1P53680 142 aaPredicted RBP7.61□□□□□ -1.19
UPF2-202ENST00000357604 RSPO1Q2MKA7 263 aaPredicted RBP7.61□□□□□ -1.19
UPF2-202ENST00000357604 Q6P435 159 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 SPAG16Q8N0X2 631 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 TERB2Q8NHR7 220 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 SLC35E1Q96K37 410 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 SSX3Q99909 188 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 KCNIP2Q9NS61 270 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 C19orf12Q9NSK7 152 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 IGKV1-27A0A075B6S5 117 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 TRAV24A0A0B4J272 114 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 INMT-MINDY4F8WBC2 141 aa7.61□□□□□ -1.19
UPF2-202ENST00000357604 UPK1BO75841 260 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms