RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 OR1F12Q8NHA8 337 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 C20orf144Q9BQM9 153 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 CBY1Q9Y3M2 126 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 EML6Q6ZMW3 1958 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 TP53I11O14683 189 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 SYNGR2O43760 224 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 OR7C1O76099 320 aaPredicted RBP10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 VAMP5O95183 116 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 IGKV1-39P01597 117 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 IGKV1D-39P04432 117 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 RPLP1P05386 114 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 CTXN2P0C2S0 81 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 TUBG1P23258 451 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 PRSS12P56730 875 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 MRPS11P82912 194 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 MRPL30Q8TCC3 161 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 ATP23Q9Y6H3 246 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 KNL1Q8NG31 2342 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 IGHV1OR21-1A0A087WYE8 117 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 MLNRO43193 412 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 NPSP0C0P6 89 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 OR3A1P47881 315 aa10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 MRPS17Q9Y2R5 130 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-201ENST00000357276 SOX15O60248 233 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 LILRA1O75019 489 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 CLDN15P56746 228 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 ZNF611Q8N823 705 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 TAF15Q92804 592 aaKnown RBP eCLIP10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 LHX4Q969G2 390 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 WNT16Q9UBV4 365 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 PXMP4Q9Y6I8 212 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 KIR2DS1A0A191URI9 304 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 A0A1W2PR77 199 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 CD99P14209 185 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 KIR2DS4P43632 304 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 ARL4DP49703 201 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 OR1D5P58170 312 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 UBE2NP61088 152 aaKnown RBP10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 HBG1P69891 147 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 HBG2P69892 147 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 KIR2DS1Q14954 304 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 ZNF324BQ6AW86 544 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 SPSB4Q96A44 273 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 OR4C12Q96R67 309 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 CDX2Q99626 313 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 PCED1AQ9H1Q7 454 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 NUPR1O60356 82 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 HPRT1P00492 218 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 TEX43Q6ZNM6 134 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 RPUSD4Q96CM3 377 aaKnown RBP10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 ULBP2Q9BZM5 246 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 PLK3Q9H4B4 646 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 PSENENQ9NZ42 101 aa10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 CHCHD2Q9Y6H1 151 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-201ENST00000357276 ZNF816-ZNF321PA0A0X1KG74 233 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 LMO7DNF2Z398 122 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 SCGB1D1O95968 90 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 IGLV2-14P01704 120 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 GYPAP02724 150 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 LCATP04180 440 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 IL3RAP26951 378 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 DEFB133Q30KQ1 61 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 ANKRD39Q53RE8 183 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 FAM69BQ5VUD6 431 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 ZCCHC14Q8WYQ9 949 aaKnown RBP10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 THOC3Q96J01 351 aaKnown RBP10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 UCN2Q96RP3 112 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 GPR35Q9HC97 309 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 MANBALQ9NQG1 85 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 SLC39A9Q9NUM3 307 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 BRWD1Q9NSI6 2320 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 TRBV6-6A0A0A6YYG2 114 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 TNFSF12O43508 249 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 PSG2P11465 335 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 PSMB3P49720 205 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 TMEM256Q8N2U0 113 aa10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 SPACA9Q96E40 222 aaPredicted RBP10.3□□□□□ -0.76
SMARCAL1-201ENST00000357276 IGKV1-5P01602 117 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 ESDP10768 282 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 BRS3P32247 399 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 IZUMO4Q1ZYL8 232 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 PLCXD3Q63HM9 321 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 ACSM6Q6P461 480 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 SAXO1Q8IYX7 474 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 PRR18Q8N4B5 295 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 FGF21Q9NSA1 209 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 MED12Q93074 2177 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 CTXND1A0A1B0GTU2 59 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 NPIPA2E9PIF3 369 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 NPIPA3F8WFD2 350 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 TNFSF13O75888 250 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 IRF2P14316 349 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 EPHA8P29322 1005 aaPredicted RBP10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 FGF12P61328 243 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 HNRNPKP61978 463 aaKnown RBP eCLIP10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 FOXL1Q12952 345 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 TMEM14EPQ6UXP3 125 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 KMT5CQ86Y97 462 aa10.29□□□□□ -0.76
SMARCAL1-201ENST00000357276 PLXDC1Q8IUK5 500 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms