RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 DPAGT1Q9H3H5 408 aa3.22□□□□□ -1.89
CNOT4-202ENST00000356162 CHMP1AQ9HD42 196 aaPredicted RBP3.22□□□□□ -1.89
CNOT4-202ENST00000356162 ESM1Q9NQ30 184 aa3.22□□□□□ -1.89
CNOT4-202ENST00000356162 C12orf4Q9NQ89 552 aa3.22□□□□□ -1.89
CNOT4-202ENST00000356162 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.22□□□□□ -1.89
CNOT4-202ENST00000356162 PLEKHJ1Q9NW61 149 aa3.22□□□□□ -1.89
CNOT4-202ENST00000356162 RHBDL2Q9NX52 303 aa3.22□□□□□ -1.89
CNOT4-202ENST00000356162 GFOD1Q9NXC2 390 aa3.22□□□□□ -1.89
CNOT4-202ENST00000356162 KCNIP1Q9NZI2 227 aa3.22□□□□□ -1.89
CNOT4-202ENST00000356162 AK3Q9UIJ7 227 aa3.22□□□□□ -1.89
CNOT4-202ENST00000356162 DAPK2Q9UIK4 370 aa3.22□□□□□ -1.89
CNOT4-202ENST00000356162 JPT1Q9UK76 154 aa3.22□□□□□ -1.89
CNOT4-202ENST00000356162 TEP1Q99973 2627 aaKnown RBP3.22□□□□□ -1.89
CNOT4-202ENST00000356162 NAV3Q8IVL0 2385 aa3.22□□□□□ -1.89
CNOT4-202ENST00000356162 ZANQ9Y493 2812 aa3.22□□□□□ -1.89
CNOT4-202ENST00000356162 SONP18583 2426 aaKnown RBP3.22□□□□□ -1.89
CNOT4-202ENST00000356162 MEX3AA1L020 520 aaKnown RBP3.21□□□□□ -1.9
CNOT4-202ENST00000356162 RNF212BA8MTL3 300 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 SERPINE3A8MV23 424 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 VGLL3A8MV65 326 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 SDCBPO00560 298 aaPredicted RBP3.21□□□□□ -1.9
CNOT4-202ENST00000356162 TOR1AO14656 332 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 NOL3O60936 208 aaKnown RBP3.21□□□□□ -1.9
CNOT4-202ENST00000356162 IGLV1-47P01700 117 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 HBZP02008 142 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 TFAP2AP05549 437 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 CD3GP09693 182 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 NFYBP25208 207 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 IL3RAP26951 378 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 CEACAM3P40198 252 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 RPL5P46777 297 aaKnown RBP3.21□□□□□ -1.9
CNOT4-202ENST00000356162 DYNLT3P51808 116 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 ARHGDIBP52566 201 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 PRRX1P54821 245 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 TMEM50BP56557 158 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 NCS1P62166 190 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 MRPS15P82914 257 aaKnown RBP3.21□□□□□ -1.9
CNOT4-202ENST00000356162 SLC9A3R2Q15599 337 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 KRTAP24-1Q3LI83 254 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 IDNKQ5T6J7 187 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 STEAP3Q658P3 488 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 Q6ZTK2 550 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 OR4K15Q8NH41 348 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 NDNFQ8TB73 568 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 CCDC107Q8WV48 283 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 SLC25A46Q96AG3 418 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 SLC25A38Q96DW6 304 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 MALSU1Q96EH3 234 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 AJUBAQ96IF1 538 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 ARHGAP5-AS1Q96IT6 56 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 CMSS1Q9BQ75 279 aaKnown RBP3.21□□□□□ -1.9
CNOT4-202ENST00000356162 MMP28Q9H239 520 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 SCOCQ9UIL1 159 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 VPREB3Q9UKI3 123 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 SPATA2Q9UM82 520 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 SOX21Q9Y651 276 aaPredicted RBP3.21□□□□□ -1.9
CNOT4-202ENST00000356162 TRAV39A0A0B4J263 110 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 LEUTXA8MZ59 168 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 J3QR06 171 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 RAB27BO00194 218 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 HOXA3O43365 443 aaPredicted RBP3.21□□□□□ -1.9
CNOT4-202ENST00000356162 RGS11O94810 467 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 DIRAS3O95661 229 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 OMGP23515 440 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 DTYMKP23919 212 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 HTR1DP28221 377 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 TGFBR1P36897 503 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 IER3P46695 156 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 VBP1P61758 197 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 LSM3P62310 102 aaKnown RBP3.21□□□□□ -1.9
CNOT4-202ENST00000356162 HTD2P86397 168 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 CTF1Q16619 201 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 SRSF7Q16629 238 aaKnown RBP eCLIP3.21□□□□□ -1.9
CNOT4-202ENST00000356162 PNLIPRP3Q17RR3 467 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 MOGAT2Q3SYC2 334 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 PLAC9Q5JTB6 97 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 UBE2NLQ5JXB2 153 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 TPTE2P1Q5T6R2 138 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 GPR107Q5VW38 600 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 CCDC144NLQ6NUI1 221 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 BAIAP2L2Q6UXY1 529 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 LHFPL4Q7Z7J7 247 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 C1QL4Q86Z23 238 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.21□□□□□ -1.9
CNOT4-202ENST00000356162 ZNF439Q8NDP4 499 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 OR5H6Q8NGV6 325 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 OR1L1Q8NH94 360 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 RAB2BQ8WUD1 216 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 ACOT12Q8WYK0 555 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 TOMM40LQ969M1 308 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 CMTM3Q96MX0 182 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 FAAP24Q9BTP7 215 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 CABLES2Q9BTV7 478 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 C19orf24Q9BVV8 132 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 ATG5Q9H1Y0 275 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 TAF9BQ9HBM6 251 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 Q9N2K0 584 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 RAB18Q9NP72 206 aa3.21□□□□□ -1.9
CNOT4-202ENST00000356162 ABCB10Q9NRK6 738 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms