RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 HERPUD1Q15011 391 aa11.09□□□□□ -0.63
SYNCRIP-201ENST00000355238 ZNF506Q5JVG8 444 aa11.09□□□□□ -0.63
SYNCRIP-201ENST00000355238 IER2Q9BTL4 223 aa11.09□□□□□ -0.63
SYNCRIP-201ENST00000355238 TGIF2LYQ8IUE0 185 aa11.09□□□□□ -0.63
SYNCRIP-201ENST00000355238 TTC3P53804 2025 aa11.09□□□□□ -0.63
SYNCRIP-201ENST00000355238 TRGV5A0A0B4J1U4 118 aa11.09□□□□□ -0.63
SYNCRIP-201ENST00000355238 LOC107984156A0A0G2JMH3 177 aa11.09□□□□□ -0.63
SYNCRIP-201ENST00000355238 ISG15P05161 165 aa11.09□□□□□ -0.63
SYNCRIP-201ENST00000355238 GCSHP23434 173 aa11.09□□□□□ -0.63
SYNCRIP-201ENST00000355238 ZP1P60852 638 aa11.09□□□□□ -0.63
SYNCRIP-201ENST00000355238 ARL17AQ8IVW1 177 aa11.09□□□□□ -0.63
SYNCRIP-201ENST00000355238 ZPLD1Q8TCW7 415 aa11.09□□□□□ -0.63
SYNCRIP-201ENST00000355238 QTRT1Q9BXR0 403 aaKnown RBP11.09□□□□□ -0.63
SYNCRIP-201ENST00000355238 ZDHHC8Q9ULC8 765 aa11.09□□□□□ -0.63
SYNCRIP-201ENST00000355238 PATE4P0C8F1 98 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 SLC35B1P78383 322 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 ROM1Q03395 351 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 TNXAQ16473 311 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 CST9Q5W186 159 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 DGAT2L7PQ6IED9 249 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 GUCD1Q96NT3 240 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 A0A0U1RQV5 110 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM90A26D6RGX4 464 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 GOSR1O95249 250 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 CD160O95971 181 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 MYOGP15173 224 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 CTGFP29279 349 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 ID4P47928 161 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 GNB2P62879 340 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 ZAR1Q86SH2 424 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 GPBAR1Q8TDU6 330 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 GABRG3Q99928 467 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 OPN3Q9H1Y3 402 aaPredicted RBP11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 TOGARAM1Q9Y4F4 1720 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 A0A087WWC5 75 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 LCN2P80188 198 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 POC1AQ8NBT0 407 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 RASL11BQ9BPW5 248 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 SYNGR1O43759 233 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 VENTXO95231 258 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 SRIP30626 198 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 KIR2DL1P43626 348 aaPredicted RBP11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 KIR2DL2P43627 348 aaPredicted RBP11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 ZNF124Q15973 351 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 ANKRD33Q7Z3H0 272 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 TM4SF19Q96DZ7 209 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 KIF13BQ9NQT8 1826 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 TMEM250H0YL14 139 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 GLULP15104 373 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 DNAJC4Q9NNZ3 241 aa11.08□□□□□ -0.64
SYNCRIP-201ENST00000355238 DHRS7CA6NNS2 312 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 OR2H1Q9GZK4 316 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 C5orf66Q9H5L9 145 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 LOXL2Q9Y4K0 774 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 IGHV5-51A0A0C4DH38 117 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 NPIPB7O75200 414 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 OR1L8Q8NGR8 309 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 LSM10Q969L4 123 aaKnown RBP11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 NDUFAF3Q9BU61 184 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 CXCL10P02778 98 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 CCL2P13500 99 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 ZP4Q12836 540 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 NIT1Q86X76 327 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 OR1N2Q8NGR9 330 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 SH3BGRL3Q9H299 93 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 LOC389332A0A1B0GUA5 103 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 GCM2O75603 506 aaPredicted RBP11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 HPRT1P00492 218 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 ASAH2BP0C7U1 165 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 PQLC2Q6ZP29 291 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 KCNMB2Q9Y691 235 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 UPK3AO75631 287 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 CISD3P0C7P0 127 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 WNT5AP41221 380 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 NPBWR2P48146 333 aa11.07□□□□□ -0.64
SYNCRIP-201ENST00000355238 COL16A1Q07092 1604 aaPredicted RBP11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 DPRXA6NFQ7 191 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 DNPH1O43598 174 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 CLEC5AQ9NY25 188 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 TNRC6CQ9HCJ0 1690 aaKnown RBP11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 KHDC1LQ5JSQ8 128 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 OR5R1Q8NH85 324 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 ARAP2Q8WZ64 1704 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 GNG7O60262 68 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 CEACAM3P40198 252 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 CXorf66Q5JRM2 361 aaPredicted RBP11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 ZCCHC14Q8WYQ9 949 aaKnown RBP11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 HIST1H4GQ99525 98 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 J3QR06 171 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 PIN1P1O15428 100 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 TNFSF14O43557 240 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 PRSS12P56730 875 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 ATRAIDQ6UW56 229 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 Q8WTZ3 238 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 SFRP2Q96HF1 295 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 RBKSQ9H477 322 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 ASCL3Q9NQ33 180 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 DOCK2Q92608 1830 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 MEX3AA1L020 520 aaKnown RBP11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 SH2D7A6NKC9 451 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms