RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 C9orf66Q5T8R8 295 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 PRR18Q8N4B5 295 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 TMEM80Q96HE8 168 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 CYYR1Q96J86 154 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 OR14A2Q96R54 314 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 BANF2Q9H503 90 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 PEX16Q9Y5Y5 336 aa11.31□□□□□ -0.6
PRPF40A-201ENST00000354363 LANCL1O43813 399 aa11.3□□□□□ -0.6
PRPF40A-201ENST00000354363 SC5DO75845 299 aa11.3□□□□□ -0.6
PRPF40A-201ENST00000354363 BAG2O95816 211 aa11.3□□□□□ -0.6
PRPF40A-201ENST00000354363 IGF1P05019 195 aa11.3□□□□□ -0.6
PRPF40A-201ENST00000354363 ADARB1P78563 741 aaKnown RBP11.3□□□□□ -0.6
PRPF40A-201ENST00000354363 AWAT2Q6E213 333 aa11.3□□□□□ -0.6
PRPF40A-201ENST00000354363 TRAT1Q6PIZ9 186 aa11.3□□□□□ -0.6
PRPF40A-201ENST00000354363 C4orf3Q8WVX3 66 aa11.3□□□□□ -0.6
PRPF40A-201ENST00000354363 KCTD7Q96MP8 289 aa11.3□□□□□ -0.6
PRPF40A-201ENST00000354363 SELENOIQ9C0D9 397 aa11.3□□□□□ -0.6
PRPF40A-201ENST00000354363 CHCHD3Q9NX63 227 aaKnown RBP11.3□□□□□ -0.6
PRPF40A-201ENST00000354363 ZNF580Q9UK33 172 aa11.3□□□□□ -0.6
PRPF40A-201ENST00000354363 LSM4Q9Y4Z0 139 aaKnown RBP11.3□□□□□ -0.6
PRPF40A-201ENST00000354363 FAM90A10PA6NDY2 464 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 FAM90A7PA6NKC0 464 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 FAM90A23PA8MXZ1 464 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 CA11O75493 328 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 MAS1P04201 325 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 MGMTP16455 207 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 PSMB8P28062 276 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 MED21Q13503 144 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 MORN2Q502X0 79 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 STEAP3Q658P3 488 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 SIGIRRQ6IA17 410 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 LYPD6Q86Y78 171 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 CDH26Q8IXH8 852 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 GGHQ92820 318 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 PRR25Q96S07 402 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 TAF9BQ9HBM6 251 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 ZNF107Q9UII5 783 aaPredicted RBP11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 TENM3Q9P273 2699 aa11.29□□□□□ -0.6
PRPF40A-201ENST00000354363 PNMA8CA0A1B0GUJ8 204 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 UBE2QL1A1L167 161 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 SEC14L6B5MCN3 397 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 GLAP06280 429 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 SLC2A2P11168 524 aaPredicted RBP11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 FUT3P21217 361 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 MYF6P23409 242 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 FHL3Q13643 280 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 GNMTQ14749 295 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 MMDQ15546 238 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 C5orf24Q7Z6I8 188 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 OR52L2PQ8NGH6 319 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 MYOZ3Q8TDC0 251 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 CYGBQ8WWM9 190 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 Q96M66 194 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 DERL3Q96Q80 235 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 OR2S2Q9NQN1 319 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 MBNL3Q9NUK0 354 aaKnown RBP11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 SCOCQ9UIL1 159 aa11.28□□□□□ -0.6
PRPF40A-201ENST00000354363 CRTAPO75718 401 aaPredicted RBP11.27□□□□□ -0.6
PRPF40A-201ENST00000354363 NHLRC4P0CG21 123 aaPredicted RBP11.27□□□□□ -0.6
PRPF40A-201ENST00000354363 OR5H8P0DN80 308 aa11.27□□□□□ -0.6
PRPF40A-201ENST00000354363 CAPGP40121 348 aa11.27□□□□□ -0.6
PRPF40A-201ENST00000354363 ECI1P42126 302 aa11.27□□□□□ -0.6
PRPF40A-201ENST00000354363 ST3GAL4Q11206 333 aa11.27□□□□□ -0.6
PRPF40A-201ENST00000354363 TTC23Q5W5X9 447 aa11.27□□□□□ -0.6
PRPF40A-201ENST00000354363 ODF3L1Q8IXM7 274 aa11.27□□□□□ -0.6
PRPF40A-201ENST00000354363 MRPL30Q8TCC3 161 aaKnown RBP11.27□□□□□ -0.6
PRPF40A-201ENST00000354363 CHCHD6Q9BRQ6 235 aa11.27□□□□□ -0.6
PRPF40A-201ENST00000354363 ABHD14AQ9BUJ0 271 aa11.27□□□□□ -0.6
PRPF40A-201ENST00000354363 PDCD6O75340 191 aa11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 PPIFP30405 207 aaKnown RBP11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 TAS2R43P59537 309 aa11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 KIAA0141Q14154 515 aaPredicted RBP11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 DOC2BQ14184 412 aa11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 NKAPLQ5M9Q1 402 aa11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 ZNF554Q86TJ5 538 aa11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 SETD9Q8NE22 299 aa11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 OR11H1Q8NG94 326 aa11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 RITA1Q96K30 269 aa11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 NABP2Q9BQ15 211 aa11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 MRPL20Q9BYC9 149 aaKnown RBP11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 KLK15Q9H2R5 256 aa11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 KCNIP1Q9NZI2 227 aa11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 JPT1Q9UK76 154 aa11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 U3KQK5 164 aa11.27□□□□□ -0.61
PRPF40A-201ENST00000354363 G3V318 75 aa11.26□□□□□ -0.61
PRPF40A-201ENST00000354363 CNTFRP26992 372 aa11.26□□□□□ -0.61
PRPF40A-201ENST00000354363 PPP1CCP36873 323 aaKnown RBP11.26□□□□□ -0.61
PRPF40A-201ENST00000354363 ACTBP60709 375 aa11.26□□□□□ -0.61
PRPF40A-201ENST00000354363 LRRC36Q1X8D7 754 aa11.26□□□□□ -0.61
PRPF40A-201ENST00000354363 NKAIN3Q8N8D7 197 aa11.26□□□□□ -0.61
PRPF40A-201ENST00000354363 ZNF491Q8N8L2 437 aa11.26□□□□□ -0.61
PRPF40A-201ENST00000354363 FAM46BQ96A09 425 aa11.26□□□□□ -0.61
PRPF40A-201ENST00000354363 GNB4Q9HAV0 340 aa11.26□□□□□ -0.61
PRPF40A-201ENST00000354363 WSB1Q9Y6I7 421 aa11.26□□□□□ -0.61
PRPF40A-201ENST00000354363 EFCAB10A6NFE3 127 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 I3L521 148 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 ATP6V0E1O15342 81 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 YPEL1O60688 119 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 HLA-DRB1P01911 266 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 CD1AP06126 327 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms