RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 MDFIC2A0A1B0GVS7 189 aa18■□□□□ 0.47
SHMT1-203ENST00000354098 A0A1W2PPE3 182 aa18■□□□□ 0.47
SHMT1-203ENST00000354098 MEIS3P1A6NDR6 274 aa18■□□□□ 0.47
SHMT1-203ENST00000354098 FCER2P06734 321 aa18■□□□□ 0.47
SHMT1-203ENST00000354098 GSTT2P0CG29 244 aa18■□□□□ 0.47
SHMT1-203ENST00000354098 GSTT2BP0CG30 244 aa18■□□□□ 0.47
SHMT1-203ENST00000354098 GNG10P50151 68 aa18■□□□□ 0.47
SHMT1-203ENST00000354098 GVQW1Q8N7I0 195 aa18■□□□□ 0.47
SHMT1-203ENST00000354098 AJUBAQ96IF1 538 aa18■□□□□ 0.47
SHMT1-203ENST00000354098 ZNF48Q96MX3 618 aaPredicted RBP18■□□□□ 0.47
SHMT1-203ENST00000354098 MMP27Q9H306 513 aa18■□□□□ 0.47
SHMT1-203ENST00000354098 NF1P21359 2839 aa18■□□□□ 0.47
SHMT1-203ENST00000354098 IGLV1-47P01700 117 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 PAX6P26367 422 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 TNFSF8P32971 234 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 HTD2P86397 168 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 HERPUD1Q15011 391 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 DEFB112Q30KQ8 113 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 MIDNQ504T8 468 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 DIRAS2Q96HU8 199 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 ADAM30Q9UKF2 790 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 SETD2Q9BYW2 2564 aaPredicted RBP17.99■□□□□ 0.47
SHMT1-203ENST00000354098 FABP7O15540 132 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 PRSS3P35030 304 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 PPP1CCP36873 323 aaKnown RBP17.99■□□□□ 0.47
SHMT1-203ENST00000354098 SRSF7Q16629 238 aaKnown RBP eCLIP17.99■□□□□ 0.47
SHMT1-203ENST00000354098 IGSF11Q5DX21 431 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 OR4P4Q8NGL7 312 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 OR9G1Q8NH87 305 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 ABHD1Q96SE0 405 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 OCSTAMPQ9BR26 566 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 OCEL1Q9H607 264 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 BATF3Q9NR55 127 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 OR1A1Q9P1Q5 309 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 A3GALT2U3KPV4 340 aa17.99■□□□□ 0.47
SHMT1-203ENST00000354098 J3QR06 171 aa17.98■□□□□ 0.47
SHMT1-203ENST00000354098 TOR1AO14656 332 aa17.98■□□□□ 0.47
SHMT1-203ENST00000354098 KIR2DS4P43632 304 aa17.98■□□□□ 0.47
SHMT1-203ENST00000354098 ZNF134P52741 427 aa17.98■□□□□ 0.47
SHMT1-203ENST00000354098 LGALS4P56470 323 aa17.98■□□□□ 0.47
SHMT1-203ENST00000354098 KIR2DS1Q14954 304 aa17.98■□□□□ 0.47
SHMT1-203ENST00000354098 TUSC1Q2TAM9 212 aa17.98■□□□□ 0.47
SHMT1-203ENST00000354098 MORN2Q502X0 79 aa17.98■□□□□ 0.47
SHMT1-203ENST00000354098 Q6ZS49 121 aa17.98■□□□□ 0.47
SHMT1-203ENST00000354098 SLC23A1Q9UHI7 598 aa17.98■□□□□ 0.47
SHMT1-203ENST00000354098 JPT1Q9UK76 154 aa17.98■□□□□ 0.47
SHMT1-203ENST00000354098 SLC31A2O15432 143 aa17.97■□□□□ 0.47
SHMT1-203ENST00000354098 PRRX1P54821 245 aa17.97■□□□□ 0.47
SHMT1-203ENST00000354098 TMEM30BQ3MIR4 351 aa17.97■□□□□ 0.47
SHMT1-203ENST00000354098 BEND2Q8NDZ0 799 aa17.97■□□□□ 0.47
SHMT1-203ENST00000354098 OR4A4PQ8NGN8 299 aa17.97■□□□□ 0.47
SHMT1-203ENST00000354098 SCGB2A2Q13296 93 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 HLA-DRB5Q30154 266 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 HOGA1Q86XE5 327 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 DYNAPQ8N1N2 210 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 SIGLECL1Q8N7X8 197 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 ZNF439Q8NDP4 499 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 ZNF596Q8TC21 504 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 MMP28Q9H239 520 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 FAM96BQ9Y3D0 163 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 BET1O15155 118 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 CNPY1Q3B7I2 92 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 RNASE12Q5GAN4 147 aaKnown RBP17.96■□□□□ 0.47
SHMT1-203ENST00000354098 CT45A1Q5HYN5 189 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 STEAP3Q658P3 488 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 BEST4Q8NFU0 473 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 CT45A3Q8NHU0 189 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 GPX8Q8TED1 209 aa17.96■□□□□ 0.47
SHMT1-203ENST00000354098 PARP12Q9H0J9 701 aaKnown RBP17.96■□□□□ 0.47
SHMT1-203ENST00000354098 BUB1B-PAK6H3BSN5 160 aa17.95■□□□□ 0.46
SHMT1-203ENST00000354098 YPEL1O60688 119 aa17.95■□□□□ 0.46
SHMT1-203ENST00000354098 HTR1DP28221 377 aa17.95■□□□□ 0.46
SHMT1-203ENST00000354098 CEACAM6P40199 344 aa17.95■□□□□ 0.46
SHMT1-203ENST00000354098 SNAPC3Q92966 411 aa17.95■□□□□ 0.46
SHMT1-203ENST00000354098 YPEL2Q96QA6 119 aa17.95■□□□□ 0.46
SHMT1-203ENST00000354098 CABLES2Q9BTV7 478 aa17.95■□□□□ 0.46
SHMT1-203ENST00000354098 ANXA10Q9UJ72 324 aa17.95■□□□□ 0.46
SHMT1-203ENST00000354098 TBL2Q9Y4P3 447 aaKnown RBP17.95■□□□□ 0.46
SHMT1-203ENST00000354098 HSPA12AO43301 675 aa17.94■□□□□ 0.46
SHMT1-203ENST00000354098 LPLP06858 475 aa17.94■□□□□ 0.46
SHMT1-203ENST00000354098 ZBTB25P24278 435 aa17.94■□□□□ 0.46
SHMT1-203ENST00000354098 S100A5P33763 92 aa17.94■□□□□ 0.46
SHMT1-203ENST00000354098 CBX5P45973 191 aa17.94■□□□□ 0.46
SHMT1-203ENST00000354098 IL18Q14116 193 aa17.94■□□□□ 0.46
SHMT1-203ENST00000354098 SSX2Q16385 188 aa17.94■□□□□ 0.46
SHMT1-203ENST00000354098 SLC25A48Q6ZT89 311 aaKnown RBP17.94■□□□□ 0.46
SHMT1-203ENST00000354098 HILPDAQ9Y5L2 63 aa17.94■□□□□ 0.46
SHMT1-203ENST00000354098 Q3ZCU0 254 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 MINOS1Q5TGZ0 78 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 LINC00311Q8N616 119 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 C8orf31Q8N9H6 132 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 SOSTQ9BQB4 213 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 IFT46Q9NQC8 304 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 DPM3Q9P2X0 92 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 MINOS1-NBL1R4GNA1 71 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 TRBV6-7A0A0A0MS04 114 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 LY6LH3BQJ8 138 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 RGS11O94810 467 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 TPPPO94811 219 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 FBP1P09467 338 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms