RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 MYF5P13349 255 aa13.03□□□□□ -0.32
PTBP1-201ENST00000349038 COL8A2P25067 703 aa13.03□□□□□ -0.32
PTBP1-201ENST00000349038 CCKARP32238 428 aa13.03□□□□□ -0.32
PTBP1-201ENST00000349038 MPLP40238 635 aa13.03□□□□□ -0.32
PTBP1-201ENST00000349038 HNRNPA3P51991 378 aaKnown RBP13.03□□□□□ -0.32
PTBP1-201ENST00000349038 ZP4Q12836 540 aa13.03□□□□□ -0.32
PTBP1-201ENST00000349038 OR1N1Q8NGS0 311 aa13.03□□□□□ -0.32
PTBP1-201ENST00000349038 ZC2HC1AQ96GY0 325 aa13.03□□□□□ -0.32
PTBP1-201ENST00000349038 OR6C3Q9NZP0 311 aa13.03□□□□□ -0.32
PTBP1-201ENST00000349038 TP73-AS1Q9UF72 201 aa13.03□□□□□ -0.32
PTBP1-201ENST00000349038 IGKV3D-11A0A0A0MRZ8 115 aa13.02□□□□□ -0.32
PTBP1-201ENST00000349038 TCRBV21S2A2A0A5A6 115 aa13.02□□□□□ -0.32
PTBP1-201ENST00000349038 DTYMKP23919 212 aa13.02□□□□□ -0.32
PTBP1-201ENST00000349038 MALLQ13021 153 aa13.02□□□□□ -0.32
PTBP1-201ENST00000349038 ANKRD39Q53RE8 183 aa13.02□□□□□ -0.32
PTBP1-201ENST00000349038 LEMD1Q68G75 181 aa13.02□□□□□ -0.32
PTBP1-201ENST00000349038 KCNIP4Q6PIL6 250 aa13.02□□□□□ -0.32
PTBP1-201ENST00000349038 Q6ZWC4 215 aa13.02□□□□□ -0.32
PTBP1-201ENST00000349038 BADQ92934 168 aa13.02□□□□□ -0.32
PTBP1-201ENST00000349038 APH1AQ96BI3 265 aa13.02□□□□□ -0.32
PTBP1-201ENST00000349038 PSENENQ9NZ42 101 aa13.02□□□□□ -0.32
PTBP1-201ENST00000349038 COLQQ9Y215 455 aaPredicted RBP13.02□□□□□ -0.32
PTBP1-201ENST00000349038 RRP8O43159 456 aaKnown RBP13.02□□□□□ -0.33
PTBP1-201ENST00000349038 ADMP35318 185 aa13.02□□□□□ -0.33
PTBP1-201ENST00000349038 CEACAM6P40199 344 aa13.02□□□□□ -0.33
PTBP1-201ENST00000349038 IL24Q13007 206 aa13.02□□□□□ -0.33
PTBP1-201ENST00000349038 ACOT6Q3I5F7 207 aaPredicted RBP13.02□□□□□ -0.33
PTBP1-201ENST00000349038 ST6GALNAC6Q969X2 333 aa13.02□□□□□ -0.33
PTBP1-201ENST00000349038 ZNF385AQ96PM9 386 aaKnown RBP13.02□□□□□ -0.33
PTBP1-201ENST00000349038 MIEN1Q9BRT3 115 aa13.02□□□□□ -0.33
PTBP1-201ENST00000349038 IGHV3-9P01782 118 aa13.02□□□□□ -0.33
PTBP1-201ENST00000349038 FRMD6-AS1P0C7T7 363 aa13.02□□□□□ -0.33
PTBP1-201ENST00000349038 NPBWR2P48146 333 aa13.02□□□□□ -0.33
PTBP1-201ENST00000349038 BPIFB3P59826 476 aa13.02□□□□□ -0.33
PTBP1-201ENST00000349038 H1FOOQ8IZA3 346 aaPredicted RBP13.02□□□□□ -0.33
PTBP1-201ENST00000349038 SLC35E1Q96K37 410 aa13.02□□□□□ -0.33
PTBP1-201ENST00000349038 CISD1Q9NZ45 108 aaKnown RBP13.02□□□□□ -0.33
PTBP1-201ENST00000349038 M0QZK8 103 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 M0R135 149 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 SLC17A3O00476 420 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 HS3ST1O14792 307 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 GGCTO75223 188 aaKnown RBP13.01□□□□□ -0.33
PTBP1-201ENST00000349038 ASPHD1Q5U4P2 390 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 C9orf135Q5VTT2 229 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 NUFIP2Q7Z417 695 aaKnown RBP13.01□□□□□ -0.33
PTBP1-201ENST00000349038 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.01□□□□□ -0.33
PTBP1-201ENST00000349038 TDHQ8IZJ6 230 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 SELENOHQ8IZQ5 122 aaKnown RBP13.01□□□□□ -0.33
PTBP1-201ENST00000349038 TMEM234Q8WY98 164 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 ZNF799Q96GE5 643 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 ACY3Q96HD9 319 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 ZNF552Q9H707 407 aaPredicted RBP13.01□□□□□ -0.33
PTBP1-201ENST00000349038 TMEM106BQ9NUM4 274 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 IL36RNQ9UBH0 155 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 FER1L5A0AVI2 2057 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 C10orf142B7Z368 130 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 CA3P07451 260 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 LINC00614P0C842 121 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 PPP1CBP62140 327 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 SUMO1P63165 101 aaKnown RBP13.01□□□□□ -0.33
PTBP1-201ENST00000349038 BAXQ07812 192 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 FAM19A2Q8N3H0 131 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 RDH5Q92781 318 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 OR4C12Q96R67 309 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 TMEM222Q9H0R3 208 aa13.01□□□□□ -0.33
PTBP1-201ENST00000349038 KIAA1549Q9HCM3 1950 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 IGHV5-51A0A0C4DH38 117 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 NPIPB13A6NJU9 1138 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 CD300LBA8K4G0 201 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 NPIPB4C9JG80 1138 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 WDR1O75083 606 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 NDUFB4O95168 129 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 PSG2P11465 335 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 MSX1P28360 303 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 DUSP3P51452 185 aaPredicted RBP13□□□□□ -0.33
PTBP1-201ENST00000349038 EFNA3P52797 238 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 TCL1AP56279 114 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 EIF3IQ13347 325 aaKnown RBP13□□□□□ -0.33
PTBP1-201ENST00000349038 SPATA45Q537H7 98 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 ODF3L1Q8IXM7 274 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 PSMF1Q92530 271 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 STARD4Q96DR4 205 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 ZNF837Q96EG3 531 aaPredicted RBP13□□□□□ -0.33
PTBP1-201ENST00000349038 PAX1P15863 534 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 CRISP2P16562 243 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 ZNF90Q03938 601 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 FAM89BQ8N5H3 189 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 IFI44Q8TCB0 444 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 MTCH2Q9Y6C9 303 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 ZNF732B4DXR9 585 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 NPIPA2E9PIF3 369 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 GDF9O60383 454 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 IGKV1D-33P01593 117 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 IGKV1-33P01594 117 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 CAPZBP47756 277 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 AMTP48728 403 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 SAPCD1Q5SSQ6 148 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 PLCXD3Q63HM9 321 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 MRGPRGQ86SM5 289 aa13□□□□□ -0.33
PTBP1-201ENST00000349038 SAXO1Q8IYX7 474 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms