RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SLC25A48Q6ZT89 311 aaKnown RBP7.73□□□□□ -1.17
ATXN3-201ENST00000340660 MBOAT2Q6ZWT7 520 aa7.73□□□□□ -1.17
ATXN3-201ENST00000340660 TRPM8Q7Z2W7 1104 aa7.73□□□□□ -1.17
ATXN3-201ENST00000340660 PROKR2Q8NFJ6 384 aa7.73□□□□□ -1.17
ATXN3-201ENST00000340660 THRSPQ92748 146 aa7.73□□□□□ -1.17
ATXN3-201ENST00000340660 USMG5Q96IX5 58 aa7.73□□□□□ -1.17
ATXN3-201ENST00000340660 IGKV1-27A0A075B6S5 117 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 A0A1B0GW64 132 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 ZNF705EA8MWA4 302 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-201ENST00000340660 GASTP01350 101 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 PPIBP23284 216 aaKnown RBP7.72□□□□□ -1.17
ATXN3-201ENST00000340660 NPY1RP25929 384 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 PAFAH1B1P43034 410 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 TEX30Q5JUR7 227 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 TMEM88Q6PEY1 159 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 ZNF730Q6ZMV8 503 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 SLC25A26Q70HW3 274 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 TMEM179BQ7Z7N9 219 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 RNF113BQ8IZP6 322 aaKnown RBP7.72□□□□□ -1.17
ATXN3-201ENST00000340660 FAM58AQ8N1B3 248 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 C8orf31Q8N9H6 132 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 ZNF565Q8N9K5 539 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 OR10A7Q8NGE5 316 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 PRRC1Q96M27 445 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 ABHD6Q9BV23 337 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 EXOSC4Q9NPD3 245 aaKnown RBP7.72□□□□□ -1.17
ATXN3-201ENST00000340660 DCAF13Q9NV06 445 aaKnown RBP7.72□□□□□ -1.17
ATXN3-201ENST00000340660 KIF25Q9UIL4 384 aa7.72□□□□□ -1.17
ATXN3-201ENST00000340660 TRBV2A0A0J9YWF9 115 aa7.71□□□□□ -1.18
ATXN3-201ENST00000340660 C15orf61A6NNL5 157 aa7.71□□□□□ -1.18
ATXN3-201ENST00000340660 SDHDO14521 159 aa7.71□□□□□ -1.18
ATXN3-201ENST00000340660 RRHO14718 337 aa7.71□□□□□ -1.18
ATXN3-201ENST00000340660 OR2C1O95371 312 aa7.71□□□□□ -1.18
ATXN3-201ENST00000340660 DNAH10OSP0CZ25 163 aa7.71□□□□□ -1.18
ATXN3-201ENST00000340660 PRKACAP17612 351 aa7.71□□□□□ -1.18
ATXN3-201ENST00000340660 BCL3P20749 454 aa7.71□□□□□ -1.18
ATXN3-201ENST00000340660 SPIN3Q5JUX0 258 aa7.71□□□□□ -1.18
ATXN3-201ENST00000340660 FAM131AQ6UXB0 335 aa7.71□□□□□ -1.18
ATXN3-201ENST00000340660 SETD9Q8NE22 299 aa7.71□□□□□ -1.18
ATXN3-201ENST00000340660 SPATA4Q8NEY3 305 aa7.71□□□□□ -1.18
ATXN3-201ENST00000340660 RSRC1Q96IZ7 334 aaKnown RBP7.71□□□□□ -1.18
ATXN3-201ENST00000340660 CLCC1Q96S66 551 aa7.71□□□□□ -1.18
ATXN3-201ENST00000340660 C20orf27Q9GZN8 174 aa7.71□□□□□ -1.18
ATXN3-201ENST00000340660 FNDC4Q9H6D8 234 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-201ENST00000340660 CD300AQ9UGN4 299 aa7.71□□□□□ -1.18
ATXN3-201ENST00000340660 ZNF230Q9UIE0 474 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-201ENST00000340660 MEIKINA0A087WXM9 373 aa7.7□□□□□ -1.18
ATXN3-201ENST00000340660 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.7□□□□□ -1.18
ATXN3-201ENST00000340660 TRAV39A0A0B4J263 110 aa7.7□□□□□ -1.18
ATXN3-201ENST00000340660 A8MWP6 167 aa7.7□□□□□ -1.18
ATXN3-201ENST00000340660 GIG44P09565 113 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-201ENST00000340660 C21orf33P30042 268 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-201ENST00000340660 IFNA8P32881 189 aa7.7□□□□□ -1.18
ATXN3-201ENST00000340660 YAP1P46937 504 aaKnown RBP7.7□□□□□ -1.18
ATXN3-201ENST00000340660 SLC18A1P54219 525 aa7.7□□□□□ -1.18
ATXN3-201ENST00000340660 FOXI1Q12951 378 aa7.7□□□□□ -1.18
ATXN3-201ENST00000340660 EXOSC2Q13868 293 aaKnown RBP7.7□□□□□ -1.18
ATXN3-201ENST00000340660 PLGLAQ15195 96 aa7.7□□□□□ -1.18
ATXN3-201ENST00000340660 CLVS2Q5SYC1 327 aa7.7□□□□□ -1.18
ATXN3-201ENST00000340660 ZNF562Q6V9R5 426 aa7.7□□□□□ -1.18
ATXN3-201ENST00000340660 OFCC1Q8IZS5 231 aa7.7□□□□□ -1.18
ATXN3-201ENST00000340660 TCEANCQ8N8B7 351 aa7.7□□□□□ -1.18
ATXN3-201ENST00000340660 OR1L1Q8NH94 360 aa7.7□□□□□ -1.18
ATXN3-201ENST00000340660 GRPEL2Q8TAA5 225 aa7.7□□□□□ -1.18
ATXN3-201ENST00000340660 SORT1Q99523 831 aa7.7□□□□□ -1.18
ATXN3-201ENST00000340660 GSTK1Q9Y2Q3 226 aa7.7□□□□□ -1.18
ATXN3-201ENST00000340660 FAM230AA0A1W2PPH8 454 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 A6NIN4 97 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 J3KTA2 159 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 SLC33A1O00400 549 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-201ENST00000340660 SH2D1BO14796 132 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 TSPAN4O14817 238 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 FFAR1O14842 300 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 ARPC3O15145 178 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 SPDEFO95238 335 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 CA2P00918 260 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 IGLV3-1P01715 115 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 ABHD2P08910 425 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 H2BFMP0C1H6 154 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 ATP6V1B1P15313 513 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 ZNF134P52741 427 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 ERVFC1-1P60608 527 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 TRAM2Q15035 370 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 CYP51A1Q16850 503 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 PAGE3Q5JUK9 113 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 GSG1LQ6UXU4 331 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 ZNF66Q6ZN08 573 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 FAM86B1Q8N7N1 296 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 RNF125Q96EQ8 232 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 GPR84Q9NQS5 396 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 LINC00588Q9Y4M8 146 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 SAR1BQ9Y6B6 198 aa7.69□□□□□ -1.18
ATXN3-201ENST00000340660 IGHV3-43A0A0B4J1X8 118 aa7.68□□□□□ -1.18
ATXN3-201ENST00000340660 A0A0U1RQV5 110 aa7.68□□□□□ -1.18
ATXN3-201ENST00000340660 EVPLLA8MZ36 301 aa7.68□□□□□ -1.18
ATXN3-201ENST00000340660 LANCL1O43813 399 aa7.68□□□□□ -1.18
ATXN3-201ENST00000340660 C8orf88P0DMB2 117 aa7.68□□□□□ -1.18
ATXN3-201ENST00000340660 IGHV3-43DP0DP04 118 aa7.68□□□□□ -1.18
ATXN3-201ENST00000340660 CLUP10909 449 aa7.68□□□□□ -1.18
ATXN3-201ENST00000340660 IDO1P14902 403 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms