RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 PLAC9Q5JTB6 97 aa12.31□□□□□ -0.44
VAPA-201ENST00000340541 CCDC144NLQ6NUI1 221 aa12.31□□□□□ -0.44
VAPA-201ENST00000340541 Q6ZS46 218 aa12.31□□□□□ -0.44
VAPA-201ENST00000340541 PRR18Q8N4B5 295 aa12.31□□□□□ -0.44
VAPA-201ENST00000340541 DTX3Q8N9I9 347 aa12.31□□□□□ -0.44
VAPA-201ENST00000340541 TOMM40LQ969M1 308 aa12.31□□□□□ -0.44
VAPA-201ENST00000340541 ST6GALNAC6Q969X2 333 aa12.31□□□□□ -0.44
VAPA-201ENST00000340541 RPEQ96AT9 228 aa12.31□□□□□ -0.44
VAPA-201ENST00000340541 RAB9BQ9NP90 201 aa12.31□□□□□ -0.44
VAPA-201ENST00000340541 PLEKHJ1Q9NW61 149 aa12.31□□□□□ -0.44
VAPA-201ENST00000340541 AK3Q9UIJ7 227 aa12.31□□□□□ -0.44
VAPA-201ENST00000340541 TRBV6-6A0A0A6YYG2 114 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 SMIM30A4D0T7 59 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 SLC2A2P11168 524 aaPredicted RBP12.3□□□□□ -0.44
VAPA-201ENST00000340541 GADD45AP24522 165 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 MNDAP41218 407 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 VEGFCP49767 419 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 ARHGDIBP52566 201 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 BLCAPP62952 87 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 HABP2Q14520 560 aaPredicted RBP12.3□□□□□ -0.44
VAPA-201ENST00000340541 GNMTQ14749 295 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 C2orf68Q2NKX9 166 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 CT45A1Q5HYN5 189 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 C11orf88Q6PI97 169 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 SLC25A48Q6ZT89 311 aaKnown RBP12.3□□□□□ -0.44
VAPA-201ENST00000340541 OR52L2PQ8NGH6 319 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 OR10V1Q8NGI7 309 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 OR10X1Q8NGY0 326 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 CT45A3Q8NHU0 189 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 ARHGAP5-AS1Q96IT6 56 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 HDHD3Q9BSH5 251 aaPredicted RBP12.3□□□□□ -0.44
VAPA-201ENST00000340541 PECRQ9BY49 303 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 RNF167Q9H6Y7 350 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 LIN7BQ9HAP6 207 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 SERTAD4Q9NUC0 356 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 KCNIP1Q9NZI2 227 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 GNG12Q9UBI6 72 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 RAB22AQ9UL26 194 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 SSR3Q9UNL2 185 aa12.3□□□□□ -0.44
VAPA-201ENST00000340541 HSD17B6O14756 317 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 AMY1AP04745 511 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 AMY2AP04746 511 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 CD36P16671 472 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 RANBP1P43487 201 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 RAB7AP51149 207 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 ZNF137PP52743 207 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 HTD2P86397 168 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 ZNF816Q0VGE8 651 aaPredicted RBP12.29□□□□□ -0.44
VAPA-201ENST00000340541 MOGAT2Q3SYC2 334 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 MORN2Q502X0 79 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 THNSL2Q86YJ6 484 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 OR8H3Q8N146 312 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 DRAM1Q8N682 238 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 OR56B1Q8NGI3 324 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 OR56B4Q8NH76 319 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 OR2T6Q8NHC8 308 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 RBM14Q96PK6 669 aaKnown RBP12.29□□□□□ -0.44
VAPA-201ENST00000340541 CHCHD6Q9BRQ6 235 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 OR2S2Q9NQN1 319 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 KCNK7Q9Y2U2 307 aa12.29□□□□□ -0.44
VAPA-201ENST00000340541 TRIM64CA6NLI5 447 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 NOTOA8MTQ0 251 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 RAB27BO00194 218 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 OR2F2O95006 317 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 TNFAIP8O95379 198 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 RAB6AP20340 208 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 REG1BP48304 166 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 STEAP3Q658P3 488 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 Q6ZTK2 550 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 C16orf82Q7Z2V1 217 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 TPRA1Q86W33 373 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 TSPAN14Q8NG11 270 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 PTX4Q96A99 478 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 SLC25A33Q9BSK2 321 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 CENPOQ9BU64 300 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 PRSS22Q9GZN4 317 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 RIMS4Q9H426 269 aaPredicted RBP12.28□□□□□ -0.44
VAPA-201ENST00000340541 JPT1Q9UK76 154 aa12.28□□□□□ -0.44
VAPA-201ENST00000340541 A0A087WXM4 84 aa12.27□□□□□ -0.45
VAPA-201ENST00000340541 IGHV1-3A0A0C4DH29 117 aa12.27□□□□□ -0.45
VAPA-201ENST00000340541 YPEL1O60688 119 aa12.27□□□□□ -0.45
VAPA-201ENST00000340541 GAPDHP04406 335 aaKnown RBP12.27□□□□□ -0.45
VAPA-201ENST00000340541 SNRNP70P08621 437 aaKnown RBP12.27□□□□□ -0.45
VAPA-201ENST00000340541 CLEC2LP0C7M8 214 aa12.27□□□□□ -0.45
VAPA-201ENST00000340541 SDC2P34741 201 aa12.27□□□□□ -0.45
VAPA-201ENST00000340541 PPP1CCP36873 323 aaKnown RBP12.27□□□□□ -0.45
VAPA-201ENST00000340541 LY6G6FQ5SQ64 297 aa12.27□□□□□ -0.45
VAPA-201ENST00000340541 MOB1BQ7L9L4 216 aa12.27□□□□□ -0.45
VAPA-201ENST00000340541 WIPF2Q8TF74 440 aaPredicted RBP12.27□□□□□ -0.45
VAPA-201ENST00000340541 CAPSLQ8WWF8 208 aa12.27□□□□□ -0.45
VAPA-201ENST00000340541 RTN4IP1Q8WWV3 396 aaPredicted RBP12.27□□□□□ -0.45
VAPA-201ENST00000340541 GALMQ96C23 342 aa12.27□□□□□ -0.45
VAPA-201ENST00000340541 KCTD7Q96MP8 289 aa12.27□□□□□ -0.45
VAPA-201ENST00000340541 YPEL2Q96QA6 119 aa12.27□□□□□ -0.45
VAPA-201ENST00000340541 CHMP1AQ9HD42 196 aaPredicted RBP12.27□□□□□ -0.45
VAPA-201ENST00000340541 C12orf4Q9NQ89 552 aa12.27□□□□□ -0.45
VAPA-201ENST00000340541 CMYA5Q8N3K9 4069 aa12.27□□□□□ -0.45
VAPA-201ENST00000340541 LOC100506127A0A0U1RQW1 187 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 MFNGO00587 321 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 RRP9O43818 475 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms