RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 RBFOX3A6NFN3 312 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 SMPD2O60906 423 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 PTAFRP25105 342 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 ERVK11-1P61568 191 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 PPP1CBP62140 327 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 RPL23AP62750 156 aaKnown RBP12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 HABP2Q14520 560 aaPredicted RBP12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 TESK1Q15569 626 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 RNF212Q495C1 297 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 SOHLH1Q5JUK2 328 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 SPSB3Q6PJ21 355 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 PRR18Q8N4B5 295 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 TMEM178AQ8NBL3 297 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 GMPPAQ96IJ6 420 aaPredicted RBP12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 RAB40CQ96S21 281 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 OR2J1Q9GZK6 312 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 ZDHHC11Q9H8X9 412 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 TRAPPC2LQ9UL33 140 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 ACACBO00763 2458 aa12.77□□□□□ -0.37
TNFSF13-201ENST00000338784 TRAV39A0A0B4J263 110 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 KIAA1324LA8MWY0 1029 aaPredicted RBP12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 DFFBO76075 338 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 IGLV2-14P01704 120 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 CELA3BP08861 270 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 UBE2NP61088 152 aaKnown RBP12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 RUNX1Q01196 453 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 TGFBR3Q03167 851 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 AKR1C8PQ5T2L2 129 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 SHEQ5VZ18 495 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 P4HA3Q7Z4N8 544 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 MYPOPQ86VE0 399 aaPredicted RBP12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 LSM10Q969L4 123 aaKnown RBP12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 CDH20Q9HBT6 801 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 KIAA1456Q9P272 454 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 CELSR3Q9NYQ7 3312 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 A0A1W2PR80 420 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 C1orf196B1AJZ1 125 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 TXNL1O43396 289 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 CNOT4O95628 575 aaKnown RBP12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 DAOP14920 347 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 SULT1A1P50225 295 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 ISOC2Q96AB3 205 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 UNKLQ9H9P5 680 aaKnown RBP12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 RBM7Q9Y580 266 aaKnown RBP12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 ZNF407Q9C0G0 2248 aa12.76□□□□□ -0.37
TNFSF13-201ENST00000338784 ZNF98A6NK75 572 aa12.75□□□□□ -0.37
TNFSF13-201ENST00000338784 CDIPTO14735 213 aa12.75□□□□□ -0.37
TNFSF13-201ENST00000338784 NXPH2O95156 264 aa12.75□□□□□ -0.37
TNFSF13-201ENST00000338784 IFNA4P05014 189 aa12.75□□□□□ -0.37
TNFSF13-201ENST00000338784 ZNF806P0C7X5 589 aa12.75□□□□□ -0.37
TNFSF13-201ENST00000338784 PGA5P0DJD9 388 aa12.75□□□□□ -0.37
TNFSF13-201ENST00000338784 IDH3GP51553 393 aaPredicted RBP12.75□□□□□ -0.37
TNFSF13-201ENST00000338784 TAS2R30P59541 319 aa12.75□□□□□ -0.37
TNFSF13-201ENST00000338784 TLE4Q04727 773 aa12.75□□□□□ -0.37
TNFSF13-201ENST00000338784 ZNF146Q15072 292 aa12.75□□□□□ -0.37
TNFSF13-201ENST00000338784 DPPA3Q6W0C5 159 aa12.75□□□□□ -0.37
TNFSF13-201ENST00000338784 Q6ZRM9 215 aa12.75□□□□□ -0.37
TNFSF13-201ENST00000338784 PPP1R3CQ9UQK1 317 aa12.75□□□□□ -0.37
TNFSF13-201ENST00000338784 WSB1Q9Y6I7 421 aa12.75□□□□□ -0.37
TNFSF13-201ENST00000338784 H3BP45 60 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 SH2D1BO14796 132 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 IFNA5P01569 189 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 IGKV1-39P01597 117 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 IGKV1D-39P04432 117 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 ERVS71-1P61550 626 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 IZUMO4Q1ZYL8 232 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 KRBOX4Q5JUW0 171 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 ZNF295-AS1Q8N0V1 137 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 ZNF561Q8N587 486 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 SFT2D1Q8WV19 159 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 LIN7CQ9NUP9 197 aaKnown RBP12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 CACNG5Q9UF02 275 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 KCNS2Q9ULS6 477 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 A0A1W2PPH5 198 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 IGHV1-2P23083 117 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 CEACAM6P40199 344 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 RAB2AP61019 212 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 SP5Q6BEB4 398 aaPredicted RBP12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 SLC25A24Q6NUK1 477 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 TMPRSS7Q7RTY8 843 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 SLC25A40Q8TBP6 338 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 HIPK2Q9H2X6 1198 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 TMEM9BQ9NQ34 198 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 MBNL3Q9NUK0 354 aaKnown RBP12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 COA4Q9NYJ1 87 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 WIPI2Q9Y4P8 454 aa12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 PUS1Q9Y606 427 aaKnown RBP eCLIP12.74□□□□□ -0.37
TNFSF13-201ENST00000338784 PCP4L1A6NKN8 68 aa12.73□□□□□ -0.37
TNFSF13-201ENST00000338784 A6NLC8 198 aa12.73□□□□□ -0.37
TNFSF13-201ENST00000338784 IQCF6A8MYZ5 107 aa12.73□□□□□ -0.37
TNFSF13-201ENST00000338784 SYNGR2O43760 224 aa12.73□□□□□ -0.37
TNFSF13-201ENST00000338784 WDR1O75083 606 aa12.73□□□□□ -0.37
TNFSF13-201ENST00000338784 HBE1P02100 147 aa12.73□□□□□ -0.37
TNFSF13-201ENST00000338784 CD200P41217 278 aa12.73□□□□□ -0.37
TNFSF13-201ENST00000338784 TMEM267Q0VDI3 215 aaPredicted RBP12.73□□□□□ -0.37
TNFSF13-201ENST00000338784 GABRA6Q16445 453 aa12.73□□□□□ -0.37
TNFSF13-201ENST00000338784 HAGHQ16775 308 aa12.73□□□□□ -0.37
TNFSF13-201ENST00000338784 ALKBH6Q3KRA9 238 aa12.73□□□□□ -0.37
TNFSF13-201ENST00000338784 THNSL2Q86YJ6 484 aa12.73□□□□□ -0.37
TNFSF13-201ENST00000338784 RBMXL1Q96E39 390 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms