RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 CHST5Q9GZS9 411 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 STRAPQ9Y3F4 350 aaKnown RBP5.59□□□□□ -1.51
HMG20A-201ENST00000336216 KIAA1549LQ6ZVL6 1849 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 C5orf63A6NC05 138 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 OR5H1A6NKK0 313 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 SEC14L6B5MCN3 397 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 F8VVB4 439 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 F8VWA3 439 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 UBE2CO00762 179 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 KLF7O75840 302 aaPredicted RBP5.59□□□□□ -1.51
HMG20A-201ENST00000336216 TMEM11P17152 192 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 RPL29P47914 159 aaKnown RBP5.59□□□□□ -1.51
HMG20A-201ENST00000336216 RPS23P62266 143 aaKnown RBP5.59□□□□□ -1.51
HMG20A-201ENST00000336216 CCL20P78556 96 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 AESQ08117 197 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 ZNF154Q13106 437 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 SLC25A47Q6Q0C1 308 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 FDCSPQ8NFU4 85 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 OR1K1Q8NGR3 316 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 CLDN23Q96B33 292 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 PATZ1Q9HBE1 687 aaKnown RBP5.59□□□□□ -1.51
HMG20A-201ENST00000336216 SLC2A9Q9NRM0 540 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 COL4A3Q01955 1670 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 IGHV3OR15-7A0A075B7D8 119 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 NKX2-6A6NCS4 301 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 FAM90A27PA6NNH2 459 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 FCGR3AP08637 254 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 SCTP09683 121 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 APELAP0DMC3 54 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 CD200P41217 278 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 SUPT4H1P63272 117 aaKnown RBP5.59□□□□□ -1.51
HMG20A-201ENST00000336216 HBG1P69891 147 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 HBG2P69892 147 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 CCL8P80075 99 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 RBPJQ06330 500 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 PNLIPRP3Q17RR3 467 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 SLC23A3Q6PIS1 610 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 BTNL8Q6UX41 500 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 LRRC29Q8WV35 223 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 TMEM68Q96MH6 324 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 SMIM7Q9BQ49 75 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 CACNG5Q9UF02 275 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 DMRT1Q9Y5R6 373 aa5.59□□□□□ -1.51
HMG20A-201ENST00000336216 WDFY4Q6ZS81 3184 aa5.59□□□□□ -1.52
HMG20A-201ENST00000336216 PCDH15Q96QU1 1955 aa5.59□□□□□ -1.52
HMG20A-201ENST00000336216 IGKV1D-8A0A087WSZ0 117 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 ZNF729A6NN14 1252 aaPredicted RBP5.58□□□□□ -1.52
HMG20A-201ENST00000336216 PPP5D1E7EU14 171 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 M0R1X1 148 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 FCGR3BO75015 233 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 DEDDO75618 318 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 HOXB1P14653 301 aaPredicted RBP5.58□□□□□ -1.52
HMG20A-201ENST00000336216 FSTP19883 344 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 DDTP30046 118 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 GPX4P36969 197 aaPredicted RBP5.58□□□□□ -1.52
HMG20A-201ENST00000336216 CDX1P47902 265 aaPredicted RBP5.58□□□□□ -1.52
HMG20A-201ENST00000336216 DYNLT3P51808 116 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 UBE2G2P60604 165 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 RND3P61587 244 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 ZP4Q12836 540 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 FBXW9Q5XUX1 488 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 ZNF787Q6DD87 383 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 MYPOPQ86VE0 399 aaPredicted RBP5.58□□□□□ -1.52
HMG20A-201ENST00000336216 FAM131CQ96AQ9 280 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 NAA60Q9H7X0 242 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 DEPPQ9NTK1 212 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 VPS13AQ96RL7 3174 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 A0A0A6YYD4 124 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 C3orf85A0A1B0GTC6 90 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 CLEC18AA5D8T8 446 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 H7BYZ3 331 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 TERTO14746 1132 aaKnown RBP5.58□□□□□ -1.52
HMG20A-201ENST00000336216 PPYP01298 95 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 IFNA1P01562 189 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 TRGC1P0CF51 173 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 KITLGP21583 273 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 EWSR1Q01844 656 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMG20A-201ENST00000336216 KHDC3LQ587J8 217 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 MRPL14Q6P1L8 145 aaKnown RBP5.58□□□□□ -1.52
HMG20A-201ENST00000336216 TGIF2LXQ8IUE1 241 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 LYG1Q8N1E2 194 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 CLEC18CQ8NCF0 446 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 ADGRG7Q96K78 797 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 IER2Q9BTL4 223 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 SF3B5Q9BWJ5 86 aaKnown RBP5.58□□□□□ -1.52
HMG20A-201ENST00000336216 OPN3Q9H1Y3 402 aaPredicted RBP5.58□□□□□ -1.52
HMG20A-201ENST00000336216 RIMS4Q9H426 269 aaPredicted RBP5.58□□□□□ -1.52
HMG20A-201ENST00000336216 CLDN16Q9Y5I7 305 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 B4E171 279 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 TSPAN7P41732 249 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 P2RY1P47900 373 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 GNB1P62873 340 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 H3F3AP84243 136 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 FAM3AP98173 230 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 SRSF6Q13247 344 aaKnown RBP5.58□□□□□ -1.52
HMG20A-201ENST00000336216 RAB31Q13636 194 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 PMS2P11Q13670 270 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 CXorf66Q5JRM2 361 aaPredicted RBP5.58□□□□□ -1.52
HMG20A-201ENST00000336216 C5orf24Q7Z6I8 188 aa5.58□□□□□ -1.52
HMG20A-201ENST00000336216 TBC1D26Q86UD7 250 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms